Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPS4Y2Q8TD47 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPS4Y2Q8TD47 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.46■□□□□ 0.87
RPS4Y2Q8TD47 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RPS4Y2Q8TD47 AC079834.2-201ENST00000609776 1949 ntBASIC20.46■□□□□ 0.87
RPS4Y2Q8TD47 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RPS4Y2Q8TD47 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPS4Y2Q8TD47 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
RPS4Y2Q8TD47 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPS4Y2Q8TD47 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPS4Y2Q8TD47 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y2Q8TD47 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y2Q8TD47 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y2Q8TD47 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPS4Y2Q8TD47 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y2Q8TD47 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y2Q8TD47 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y2Q8TD47 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y2Q8TD47 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y2Q8TD47 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y2Q8TD47 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPS4Y2Q8TD47 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 RP9P-202ENST00000450133 1212 ntBASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPS4Y2Q8TD47 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPS4Y2Q8TD47 FOXO3B-201ENST00000395675 1928 ntBASIC20.39■□□□□ 0.86
RPS4Y2Q8TD47 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 ECEL1P2-201ENST00000461596 1295 ntBASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
RPS4Y2Q8TD47 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.38■□□□□ 0.85
RPS4Y2Q8TD47 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RPS4Y2Q8TD47 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms