Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHD6Q8TD26 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CHD6Q8TD26 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.71■■□□□ 1.07
CHD6Q8TD26 MIR4651-201ENST00000582622 73 ntBASIC21.71■■□□□ 1.07
CHD6Q8TD26 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.7■■□□□ 1.06
CHD6Q8TD26 SNX5-217ENST00000606557 1087 ntBASIC21.7■■□□□ 1.06
CHD6Q8TD26 AC233992.3-201ENST00000607491 485 ntBASIC21.7■■□□□ 1.06
CHD6Q8TD26 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD6Q8TD26 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHD6Q8TD26 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.7■■□□□ 1.06
CHD6Q8TD26 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHD6Q8TD26 AC027612.3-201ENST00000413684 1047 ntBASIC21.7■■□□□ 1.06
CHD6Q8TD26 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHD6Q8TD26 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.7■■□□□ 1.06
CHD6Q8TD26 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHD6Q8TD26 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.69■■□□□ 1.06
CHD6Q8TD26 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.69■■□□□ 1.06
CHD6Q8TD26 NCF1B-203ENST00000435988 1254 ntBASIC21.69■■□□□ 1.06
CHD6Q8TD26 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.68■■□□□ 1.06
CHD6Q8TD26 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHD6Q8TD26 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD6Q8TD26 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.68■■□□□ 1.06
CHD6Q8TD26 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD6Q8TD26 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHD6Q8TD26 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD6Q8TD26 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD6Q8TD26 CROCCP5-201ENST00000436658 830 ntBASIC21.67■■□□□ 1.06
CHD6Q8TD26 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHD6Q8TD26 AL138724.1-201ENST00000606771 1088 ntBASIC21.67■■□□□ 1.06
CHD6Q8TD26 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHD6Q8TD26 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.66■■□□□ 1.06
CHD6Q8TD26 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.66■■□□□ 1.06
CHD6Q8TD26 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.66■■□□□ 1.06
CHD6Q8TD26 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHD6Q8TD26 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD6Q8TD26 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD6Q8TD26 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.66■■□□□ 1.06
CHD6Q8TD26 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD6Q8TD26 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CHD6Q8TD26 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD6Q8TD26 NTF6G-201ENST00000591094 616 ntBASIC21.65■■□□□ 1.06
CHD6Q8TD26 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.65■■□□□ 1.06
CHD6Q8TD26 AL135925.1-201ENST00000605920 1701 ntBASIC21.65■■□□□ 1.06
CHD6Q8TD26 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD6Q8TD26 AC006015.1-201ENST00000429970 570 ntBASIC21.65■■□□□ 1.06
CHD6Q8TD26 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CHD6Q8TD26 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHD6Q8TD26 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.64■■□□□ 1.06
CHD6Q8TD26 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.64■■□□□ 1.06
CHD6Q8TD26 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHD6Q8TD26 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.64■■□□□ 1.06
CHD6Q8TD26 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHD6Q8TD26 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHD6Q8TD26 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CHD6Q8TD26 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHD6Q8TD26 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.64■■□□□ 1.05
CHD6Q8TD26 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CHD6Q8TD26 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CHD6Q8TD26 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.64■■□□□ 1.05
CHD6Q8TD26 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHD6Q8TD26 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHD6Q8TD26 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CHD6Q8TD26 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.64■■□□□ 1.05
CHD6Q8TD26 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.64■■□□□ 1.05
CHD6Q8TD26 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.63■■□□□ 1.05
CHD6Q8TD26 TERF1P2-201ENST00000583350 1212 ntBASIC21.63■■□□□ 1.05
CHD6Q8TD26 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CHD6Q8TD26 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD6Q8TD26 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.63■■□□□ 1.05
CHD6Q8TD26 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.63■■□□□ 1.05
CHD6Q8TD26 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.63■■□□□ 1.05
CHD6Q8TD26 AL109923.1-201ENST00000618799 583 ntBASIC21.63■■□□□ 1.05
CHD6Q8TD26 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD6Q8TD26 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD6Q8TD26 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD6Q8TD26 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHD6Q8TD26 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD6Q8TD26 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.61■■□□□ 1.05
CHD6Q8TD26 AL358852.1-201ENST00000623174 1268 ntBASIC21.61■■□□□ 1.05
CHD6Q8TD26 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.61■■□□□ 1.05
CHD6Q8TD26 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD6Q8TD26 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD6Q8TD26 CCDC92B-201ENST00000575506 885 ntBASIC21.61■■□□□ 1.05
CHD6Q8TD26 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.6■■□□□ 1.05
CHD6Q8TD26 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD6Q8TD26 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.6■■□□□ 1.05
CHD6Q8TD26 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD6Q8TD26 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD6Q8TD26 AP004833.2-201ENST00000532228 1454 ntBASIC21.59■■□□□ 1.05
CHD6Q8TD26 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHD6Q8TD26 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD6Q8TD26 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD6Q8TD26 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.59■■□□□ 1.05
CHD6Q8TD26 AC073111.5-205ENST00000641717 521 ntBASIC21.59■■□□□ 1.05
CHD6Q8TD26 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms