Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLHC1Q8NHS4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CLHC1Q8NHS4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLHC1Q8NHS4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.33■■□□□ 1.17
CLHC1Q8NHS4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CLHC1Q8NHS4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.33■■□□□ 1.17
CLHC1Q8NHS4 AC141586.4-201ENST00000624558 1573 ntBASIC22.33■■□□□ 1.16
CLHC1Q8NHS4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
CLHC1Q8NHS4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 ABCB10P4-201ENST00000566803 2184 ntBASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 AL592293.1-201ENST00000502889 1188 ntBASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CLHC1Q8NHS4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CLHC1Q8NHS4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CLHC1Q8NHS4 KRT18P10-201ENST00000388836 1287 ntBASIC22.29■■□□□ 1.16
CLHC1Q8NHS4 SPCS2P3-201ENST00000500401 656 ntBASIC22.29■■□□□ 1.16
CLHC1Q8NHS4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLHC1Q8NHS4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CLHC1Q8NHS4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.29■■□□□ 1.16
CLHC1Q8NHS4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.28■■□□□ 1.16
CLHC1Q8NHS4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLHC1Q8NHS4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLHC1Q8NHS4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLHC1Q8NHS4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLHC1Q8NHS4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CLHC1Q8NHS4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLHC1Q8NHS4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.26■■□□□ 1.15
CLHC1Q8NHS4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLHC1Q8NHS4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.25■■□□□ 1.15
CLHC1Q8NHS4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLHC1Q8NHS4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
CLHC1Q8NHS4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLHC1Q8NHS4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLHC1Q8NHS4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.24■■□□□ 1.15
CLHC1Q8NHS4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CLHC1Q8NHS4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 AC018755.3-202ENST00000596210 929 ntBASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLHC1Q8NHS4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 RARRES2P2-201ENST00000394842 485 ntBASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 RPS2P7-201ENST00000447334 885 ntBASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
CLHC1Q8NHS4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CLHC1Q8NHS4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLHC1Q8NHS4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms