Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
LINS1Q8NG48 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.46■■■□□ 2.31
LINS1Q8NG48 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
LINS1Q8NG48 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
LINS1Q8NG48 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
LINS1Q8NG48 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
LINS1Q8NG48 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC29.45■■■□□ 2.31
LINS1Q8NG48 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.45■■■□□ 2.31
LINS1Q8NG48 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
LINS1Q8NG48 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.45■■■□□ 2.3
LINS1Q8NG48 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LINS1Q8NG48 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LINS1Q8NG48 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.44■■■□□ 2.3
LINS1Q8NG48 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
LINS1Q8NG48 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.44■■■□□ 2.3
LINS1Q8NG48 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LINS1Q8NG48 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LINS1Q8NG48 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LINS1Q8NG48 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LINS1Q8NG48 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.43■■■□□ 2.3
LINS1Q8NG48 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC29.43■■■□□ 2.3
LINS1Q8NG48 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
LINS1Q8NG48 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LINS1Q8NG48 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LINS1Q8NG48 TSPY9P-201ENST00000440215 945 ntBASIC29.42■■■□□ 2.3
LINS1Q8NG48 TSPY11P-201ENST00000442607 1045 ntBASIC29.42■■■□□ 2.3
LINS1Q8NG48 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.42■■■□□ 2.3
LINS1Q8NG48 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LINS1Q8NG48 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.42■■■□□ 2.3
LINS1Q8NG48 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC29.42■■■□□ 2.3
LINS1Q8NG48 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINS1Q8NG48 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LINS1Q8NG48 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.41■■■□□ 2.3
LINS1Q8NG48 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
LINS1Q8NG48 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LINS1Q8NG48 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.4■■■□□ 2.3
LINS1Q8NG48 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LINS1Q8NG48 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LINS1Q8NG48 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LINS1Q8NG48 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LINS1Q8NG48 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
LINS1Q8NG48 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.4■■■□□ 2.3
LINS1Q8NG48 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC29.39■■■□□ 2.3
LINS1Q8NG48 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
LINS1Q8NG48 KRT16P3-201ENST00000439127 1283 ntBASIC29.39■■■□□ 2.3
LINS1Q8NG48 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC29.39■■■□□ 2.3
LINS1Q8NG48 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.39■■■□□ 2.3
LINS1Q8NG48 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC29.39■■■□□ 2.29
LINS1Q8NG48 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LINS1Q8NG48 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
LINS1Q8NG48 LBH-205ENST00000407930 756 ntTSL 2 BASIC29.38■■■□□ 2.29
LINS1Q8NG48 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.38■■■□□ 2.29
LINS1Q8NG48 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.38■■■□□ 2.29
LINS1Q8NG48 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.38■■■□□ 2.29
LINS1Q8NG48 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
LINS1Q8NG48 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LINS1Q8NG48 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
LINS1Q8NG48 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.38■■■□□ 2.29
LINS1Q8NG48 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 AC131212.1-201ENST00000613771 668 ntBASIC29.37■■■□□ 2.29
LINS1Q8NG48 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.37■■■□□ 2.29
LINS1Q8NG48 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
LINS1Q8NG48 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LINS1Q8NG48 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
LINS1Q8NG48 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LINS1Q8NG48 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LINS1Q8NG48 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
LINS1Q8NG48 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
LINS1Q8NG48 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.36■■■□□ 2.29
LINS1Q8NG48 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LINS1Q8NG48 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.35■■■□□ 2.29
LINS1Q8NG48 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.35■■■□□ 2.29
LINS1Q8NG48 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
LINS1Q8NG48 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.35■■■□□ 2.29
LINS1Q8NG48 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LINS1Q8NG48 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC29.34■■■□□ 2.29
LINS1Q8NG48 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.34■■■□□ 2.29
LINS1Q8NG48 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.34■■■□□ 2.29
LINS1Q8NG48 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.33■■■□□ 2.29
LINS1Q8NG48 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
LINS1Q8NG48 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.33■■■□□ 2.29
LINS1Q8NG48 SNX5-217ENST00000606557 1087 ntBASIC29.33■■■□□ 2.29
LINS1Q8NG48 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.33■■■□□ 2.29
LINS1Q8NG48 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
LINS1Q8NG48 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINS1Q8NG48 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LINS1Q8NG48 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINS1Q8NG48 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINS1Q8NG48 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.32■■■□□ 2.28
LINS1Q8NG48 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.32■■■□□ 2.28
LINS1Q8NG48 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.32■■■□□ 2.28
LINS1Q8NG48 AC010997.5-201ENST00000609182 354 ntBASIC29.32■■■□□ 2.28
LINS1Q8NG48 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
LINS1Q8NG48 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms