Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 AC129492.7-201ENST00000622992 756 ntBASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LSMEM1Q8N8F7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LSMEM1Q8N8F7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LSMEM1Q8N8F7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LSMEM1Q8N8F7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.33■■□□□ 1.01
LSMEM1Q8N8F7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LSMEM1Q8N8F7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LSMEM1Q8N8F7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LSMEM1Q8N8F7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 KRT18P60-201ENST00000312876 1297 ntBASIC21.32■■□□□ 1
LSMEM1Q8N8F7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 ABHD17AP5-201ENST00000580133 923 ntBASIC21.32■■□□□ 1
LSMEM1Q8N8F7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 HLA-L-211ENST00000482052 1765 ntBASIC21.32■■□□□ 1
LSMEM1Q8N8F7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LSMEM1Q8N8F7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.31■■□□□ 1
LSMEM1Q8N8F7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.31■■□□□ 1
LSMEM1Q8N8F7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.3■■□□□ 1
LSMEM1Q8N8F7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
LSMEM1Q8N8F7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.3■■□□□ 1
LSMEM1Q8N8F7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LSMEM1Q8N8F7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
LSMEM1Q8N8F7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.3■■□□□ 1
LSMEM1Q8N8F7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LSMEM1Q8N8F7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 AL592295.1-201ENST00000400984 884 ntBASIC21.29■■□□□ 1
LSMEM1Q8N8F7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LSMEM1Q8N8F7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LSMEM1Q8N8F7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LSMEM1Q8N8F7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.28■■□□□ 1
LSMEM1Q8N8F7 LONRF2P2-201ENST00000439212 571 ntBASIC21.28■■□□□ 1
LSMEM1Q8N8F7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.28■■□□□ 1
LSMEM1Q8N8F7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LSMEM1Q8N8F7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
LSMEM1Q8N8F7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LSMEM1Q8N8F7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.27■■□□□ 1
LSMEM1Q8N8F7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LSMEM1Q8N8F7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.27■■□□□ 1
LSMEM1Q8N8F7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.27■■□□□ 1
LSMEM1Q8N8F7 NTF6A-201ENST00000591175 560 ntBASIC21.27■■□□□ 1
LSMEM1Q8N8F7 CLDN5-201ENST00000403084 2357 ntBASIC21.27■■□□□ 1
LSMEM1Q8N8F7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.27■■□□□ 1
LSMEM1Q8N8F7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
LSMEM1Q8N8F7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
LSMEM1Q8N8F7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 AC090877.2-201ENST00000558441 1738 ntBASIC21.26■□□□□ 0.99
LSMEM1Q8N8F7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LSMEM1Q8N8F7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms