Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
BEST3Q8N1M1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.64■■□□□ 1.05
BEST3Q8N1M1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST3Q8N1M1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST3Q8N1M1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST3Q8N1M1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST3Q8N1M1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.63■■□□□ 1.05
BEST3Q8N1M1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST3Q8N1M1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST3Q8N1M1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
BEST3Q8N1M1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST3Q8N1M1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST3Q8N1M1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST3Q8N1M1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.62■■□□□ 1.05
BEST3Q8N1M1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.62■■□□□ 1.05
BEST3Q8N1M1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.62■■□□□ 1.05
BEST3Q8N1M1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST3Q8N1M1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.62■■□□□ 1.05
BEST3Q8N1M1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
BEST3Q8N1M1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BEST3Q8N1M1 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.6■■□□□ 1.05
BEST3Q8N1M1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.6■■□□□ 1.05
BEST3Q8N1M1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.6■■□□□ 1.05
BEST3Q8N1M1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.6■■□□□ 1.05
BEST3Q8N1M1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
BEST3Q8N1M1 AC090877.2-201ENST00000558441 1738 ntBASIC21.6■■□□□ 1.05
BEST3Q8N1M1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
BEST3Q8N1M1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.59■■□□□ 1.05
BEST3Q8N1M1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.58■■□□□ 1.05
BEST3Q8N1M1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BEST3Q8N1M1 AF131216.4-201ENST00000638924 1588 ntBASIC21.58■■□□□ 1.05
BEST3Q8N1M1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
BEST3Q8N1M1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.58■■□□□ 1.05
BEST3Q8N1M1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.58■■□□□ 1.05
BEST3Q8N1M1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
BEST3Q8N1M1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
BEST3Q8N1M1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.57■■□□□ 1.04
BEST3Q8N1M1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BEST3Q8N1M1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.57■■□□□ 1.04
BEST3Q8N1M1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
BEST3Q8N1M1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 MTDHP2-201ENST00000601468 714 ntBASIC21.56■■□□□ 1.04
BEST3Q8N1M1 AC010997.5-201ENST00000609182 354 ntBASIC21.56■■□□□ 1.04
BEST3Q8N1M1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
BEST3Q8N1M1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BEST3Q8N1M1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.54■■□□□ 1.04
BEST3Q8N1M1 AC091060.1-201ENST00000623524 1766 ntBASIC21.54■■□□□ 1.04
BEST3Q8N1M1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST3Q8N1M1 AC008406.3-201ENST00000620001 1374 ntBASIC21.54■■□□□ 1.04
BEST3Q8N1M1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST3Q8N1M1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.54■■□□□ 1.04
BEST3Q8N1M1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.54■■□□□ 1.04
BEST3Q8N1M1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST3Q8N1M1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST3Q8N1M1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST3Q8N1M1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST3Q8N1M1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST3Q8N1M1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BEST3Q8N1M1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST3Q8N1M1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST3Q8N1M1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.52■■□□□ 1.04
BEST3Q8N1M1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms