Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CCDC25Q86WR0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC25Q86WR0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC25Q86WR0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.97■■□□□ 1.43
CCDC25Q86WR0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.96■■□□□ 1.43
CCDC25Q86WR0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
CCDC25Q86WR0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.95■■□□□ 1.43
CCDC25Q86WR0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCDC25Q86WR0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC25Q86WR0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC25Q86WR0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.95■■□□□ 1.42
CCDC25Q86WR0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC25Q86WR0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC25Q86WR0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC25Q86WR0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC25Q86WR0 ABHD17AP4-201ENST00000411545 909 ntBASIC23.93■■□□□ 1.42
CCDC25Q86WR0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC25Q86WR0 SMPD5-203ENST00000639008 1464 ntBASIC23.93■■□□□ 1.42
CCDC25Q86WR0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC25Q86WR0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CCDC25Q86WR0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC25Q86WR0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.92■■□□□ 1.42
CCDC25Q86WR0 AC060814.1-201ENST00000554326 538 ntBASIC23.92■■□□□ 1.42
CCDC25Q86WR0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CCDC25Q86WR0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CCDC25Q86WR0 HLA-L-211ENST00000482052 1765 ntBASIC23.91■■□□□ 1.42
CCDC25Q86WR0 C9orf163-202ENST00000624034 2573 ntBASIC23.91■■□□□ 1.42
CCDC25Q86WR0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC25Q86WR0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC25Q86WR0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC25Q86WR0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC25Q86WR0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.9■■□□□ 1.42
CCDC25Q86WR0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC25Q86WR0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC25Q86WR0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC25Q86WR0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC25Q86WR0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.89■■□□□ 1.42
CCDC25Q86WR0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC25Q86WR0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC25Q86WR0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.89■■□□□ 1.42
CCDC25Q86WR0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC25Q86WR0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CCDC25Q86WR0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC25Q86WR0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC25Q86WR0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC25Q86WR0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC25Q86WR0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC25Q86WR0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CCDC25Q86WR0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC25Q86WR0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CCDC25Q86WR0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC25Q86WR0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC25Q86WR0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC25Q86WR0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms