Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
LAPTM4BQ86VI4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LAPTM4BQ86VI4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LAPTM4BQ86VI4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LAPTM4BQ86VI4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
LAPTM4BQ86VI4 GUSBP5-201ENST00000418136 578 ntBASIC22.17■■□□□ 1.14
LAPTM4BQ86VI4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.17■■□□□ 1.14
LAPTM4BQ86VI4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.17■■□□□ 1.14
LAPTM4BQ86VI4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LAPTM4BQ86VI4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.15■■□□□ 1.14
LAPTM4BQ86VI4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LAPTM4BQ86VI4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LAPTM4BQ86VI4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LAPTM4BQ86VI4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LAPTM4BQ86VI4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LAPTM4BQ86VI4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
LAPTM4BQ86VI4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LAPTM4BQ86VI4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.14■■□□□ 1.13
LAPTM4BQ86VI4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.14■■□□□ 1.13
LAPTM4BQ86VI4 Z92544.1-202ENST00000571933 1220 ntBASIC22.14■■□□□ 1.13
LAPTM4BQ86VI4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.13
LAPTM4BQ86VI4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
LAPTM4BQ86VI4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
LAPTM4BQ86VI4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 BX664725.1-201ENST00000438252 379 ntBASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 MIR4281-201ENST00000580852 62 ntBASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 AC137630.3-201ENST00000607245 391 ntBASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.11■■□□□ 1.13
LAPTM4BQ86VI4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LAPTM4BQ86VI4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 MIR4787-201ENST00000607364 84 ntBASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.09■■□□□ 1.13
LAPTM4BQ86VI4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LAPTM4BQ86VI4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LAPTM4BQ86VI4 KRT125P-201ENST00000546827 989 ntBASIC22.08■■□□□ 1.13
LAPTM4BQ86VI4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.08■■□□□ 1.13
LAPTM4BQ86VI4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.08■■□□□ 1.13
LAPTM4BQ86VI4 AC011551.1-201ENST00000614101 683 ntBASIC22.08■■□□□ 1.13
LAPTM4BQ86VI4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LAPTM4BQ86VI4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.07■■□□□ 1.12
LAPTM4BQ86VI4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LAPTM4BQ86VI4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms