Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.93■□□□□ 0.62
C9orf139Q6ZV77 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.93■□□□□ 0.62
C9orf139Q6ZV77 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.93■□□□□ 0.62
C9orf139Q6ZV77 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf139Q6ZV77 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf139Q6ZV77 AC010501.1-201ENST00000606270 1962 ntBASIC18.93■□□□□ 0.62
C9orf139Q6ZV77 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C9orf139Q6ZV77 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf139Q6ZV77 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.92■□□□□ 0.62
C9orf139Q6ZV77 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C9orf139Q6ZV77 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
C9orf139Q6ZV77 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
C9orf139Q6ZV77 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.92■□□□□ 0.62
C9orf139Q6ZV77 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf139Q6ZV77 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.91■□□□□ 0.62
C9orf139Q6ZV77 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.91■□□□□ 0.62
C9orf139Q6ZV77 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
C9orf139Q6ZV77 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf139Q6ZV77 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf139Q6ZV77 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C9orf139Q6ZV77 MIR6722-201ENST00000617286 78 ntBASIC18.9■□□□□ 0.62
C9orf139Q6ZV77 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
C9orf139Q6ZV77 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf139Q6ZV77 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.9■□□□□ 0.62
C9orf139Q6ZV77 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
C9orf139Q6ZV77 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 SNX5-217ENST00000606557 1087 ntBASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 ERN1-208ENST00000606895 2068 ntBASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C9orf139Q6ZV77 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 AL136116.3-201ENST00000402907 1138 ntBASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 AL139246.5-201ENST00000606645 996 ntBASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C9orf139Q6ZV77 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.87■□□□□ 0.61
C9orf139Q6ZV77 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf139Q6ZV77 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.87■□□□□ 0.61
C9orf139Q6ZV77 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
C9orf139Q6ZV77 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.87■□□□□ 0.61
C9orf139Q6ZV77 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.87■□□□□ 0.61
C9orf139Q6ZV77 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.87■□□□□ 0.61
C9orf139Q6ZV77 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
C9orf139Q6ZV77 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 MIR638-201ENST00000385237 100 ntBASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 AL512631.2-201ENST00000604634 923 ntBASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C9orf139Q6ZV77 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C9orf139Q6ZV77 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
C9orf139Q6ZV77 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
C9orf139Q6ZV77 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 MIR4466-201ENST00000606121 54 ntBASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.82■□□□□ 0.6
C9orf139Q6ZV77 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms