Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.96■■□□□ 1.75
TRIM60Q495X7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TRIM60Q495X7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TRIM60Q495X7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.95■■□□□ 1.74
TRIM60Q495X7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TRIM60Q495X7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TRIM60Q495X7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
TRIM60Q495X7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
TRIM60Q495X7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TRIM60Q495X7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TRIM60Q495X7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TRIM60Q495X7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.94■■□□□ 1.74
TRIM60Q495X7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.94■■□□□ 1.74
TRIM60Q495X7 AC139426.1-201ENST00000568218 2529 ntBASIC25.93■■□□□ 1.74
TRIM60Q495X7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
TRIM60Q495X7 AC091305.1-201ENST00000479476 895 ntBASIC25.93■■□□□ 1.74
TRIM60Q495X7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.93■■□□□ 1.74
TRIM60Q495X7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TRIM60Q495X7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.93■■□□□ 1.74
TRIM60Q495X7 AC090877.2-201ENST00000558441 1738 ntBASIC25.93■■□□□ 1.74
TRIM60Q495X7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM60Q495X7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.92■■□□□ 1.74
TRIM60Q495X7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TRIM60Q495X7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
TRIM60Q495X7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.91■■□□□ 1.74
TRIM60Q495X7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM60Q495X7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.91■■□□□ 1.74
TRIM60Q495X7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.91■■□□□ 1.74
TRIM60Q495X7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRIM60Q495X7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.9■■□□□ 1.74
TRIM60Q495X7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM60Q495X7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM60Q495X7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM60Q495X7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRIM60Q495X7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
TRIM60Q495X7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM60Q495X7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM60Q495X7 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.89■■□□□ 1.74
TRIM60Q495X7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
TRIM60Q495X7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
TRIM60Q495X7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.89■■□□□ 1.74
TRIM60Q495X7 DUX4L19-201ENST00000557448 1267 ntBASIC25.89■■□□□ 1.74
TRIM60Q495X7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
TRIM60Q495X7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
TRIM60Q495X7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TRIM60Q495X7 AC004448.1-201ENST00000458332 883 ntBASIC25.88■■□□□ 1.73
TRIM60Q495X7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.88■■□□□ 1.73
TRIM60Q495X7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.88■■□□□ 1.73
TRIM60Q495X7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.88■■□□□ 1.73
TRIM60Q495X7 MIR4767-201ENST00000582827 78 ntBASIC25.88■■□□□ 1.73
TRIM60Q495X7 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.88■■□□□ 1.73
TRIM60Q495X7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
TRIM60Q495X7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM60Q495X7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TRIM60Q495X7 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.87■■□□□ 1.73
TRIM60Q495X7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.86■■□□□ 1.73
TRIM60Q495X7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TRIM60Q495X7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.86■■□□□ 1.73
TRIM60Q495X7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.86■■□□□ 1.73
TRIM60Q495X7 CA15P2-201ENST00000611168 834 ntBASIC25.86■■□□□ 1.73
TRIM60Q495X7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIM60Q495X7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIM60Q495X7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.85■■□□□ 1.73
TRIM60Q495X7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIM60Q495X7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.85■■□□□ 1.73
TRIM60Q495X7 SYT6-210ENST00000641643 1587 ntBASIC25.85■■□□□ 1.73
TRIM60Q495X7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRIM60Q495X7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
TRIM60Q495X7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TRIM60Q495X7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.84■■□□□ 1.73
TRIM60Q495X7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM60Q495X7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM60Q495X7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM60Q495X7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM60Q495X7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TRIM60Q495X7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.83■■□□□ 1.73
TRIM60Q495X7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM60Q495X7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM60Q495X7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM60Q495X7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM60Q495X7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM60Q495X7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM60Q495X7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.82■■□□□ 1.72
TRIM60Q495X7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TRIM60Q495X7 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.82■■□□□ 1.72
TRIM60Q495X7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM60Q495X7 RASA4CP-201ENST00000424092 1398 ntBASIC25.82■■□□□ 1.72
TRIM60Q495X7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM60Q495X7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM60Q495X7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
TRIM60Q495X7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.81■■□□□ 1.72
TRIM60Q495X7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIM60Q495X7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIM60Q495X7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
TRIM60Q495X7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRIM60Q495X7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.8■■□□□ 1.72
TRIM60Q495X7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.8■■□□□ 1.72
TRIM60Q495X7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIM60Q495X7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRIM60Q495X7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms