Protein–RNA interactions for Protein: Q2VWP7

PRTG, Protogenin, humanhuman

Predictions only

Length 1,150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRTGQ2VWP7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRTGQ2VWP7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.19■■□□□ 1.14
PRTGQ2VWP7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PRTGQ2VWP7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 MIR4787-201ENST00000607364 84 ntBASIC22.18■■□□□ 1.14
PRTGQ2VWP7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PRTGQ2VWP7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PRTGQ2VWP7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.16■■□□□ 1.14
PRTGQ2VWP7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 AC022211.4-201ENST00000625094 2161 ntBASIC22.15■■□□□ 1.14
PRTGQ2VWP7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PRTGQ2VWP7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
PRTGQ2VWP7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PRTGQ2VWP7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRTGQ2VWP7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRTGQ2VWP7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PRTGQ2VWP7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRTGQ2VWP7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PRTGQ2VWP7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.13■■□□□ 1.13
PRTGQ2VWP7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.13■■□□□ 1.13
PRTGQ2VWP7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PRTGQ2VWP7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 AC020928.2-201ENST00000588717 2197 ntBASIC22.11■■□□□ 1.13
PRTGQ2VWP7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 AC092028.1-203ENST00000608262 953 ntBASIC22.11■■□□□ 1.13
PRTGQ2VWP7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PRTGQ2VWP7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.1■■□□□ 1.13
PRTGQ2VWP7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PRTGQ2VWP7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
PRTGQ2VWP7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PRTGQ2VWP7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms