Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SEC61A1P61619 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.23■□□□□ 0.83
SEC61A1P61619 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SEC61A1P61619 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SEC61A1P61619 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
SEC61A1P61619 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SEC61A1P61619 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A1P61619 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A1P61619 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A1P61619 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SEC61A1P61619 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A1P61619 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.22■□□□□ 0.83
SEC61A1P61619 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.22■□□□□ 0.83
SEC61A1P61619 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SEC61A1P61619 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
SEC61A1P61619 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A1P61619 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A1P61619 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A1P61619 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A1P61619 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A1P61619 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
SEC61A1P61619 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A1P61619 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SEC61A1P61619 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SEC61A1P61619 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SEC61A1P61619 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SEC61A1P61619 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A1P61619 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A1P61619 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A1P61619 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.2■□□□□ 0.82
SEC61A1P61619 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A1P61619 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A1P61619 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SEC61A1P61619 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A1P61619 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.19■□□□□ 0.82
SEC61A1P61619 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A1P61619 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A1P61619 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A1P61619 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A1P61619 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A1P61619 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SEC61A1P61619 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.19■□□□□ 0.82
SEC61A1P61619 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A1P61619 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A1P61619 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
SEC61A1P61619 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.18■□□□□ 0.82
SEC61A1P61619 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A1P61619 MIR6765-201ENST00000614092 87 ntBASIC20.18■□□□□ 0.82
SEC61A1P61619 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.18■□□□□ 0.82
SEC61A1P61619 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.18■□□□□ 0.82
SEC61A1P61619 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A1P61619 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A1P61619 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SEC61A1P61619 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A1P61619 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SEC61A1P61619 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEC61A1P61619 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.17■□□□□ 0.82
SEC61A1P61619 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SEC61A1P61619 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SEC61A1P61619 AC018755.3-202ENST00000596210 929 ntBASIC20.16■□□□□ 0.82
SEC61A1P61619 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.16■□□□□ 0.82
SEC61A1P61619 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEC61A1P61619 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SEC61A1P61619 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.16■□□□□ 0.82
SEC61A1P61619 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SEC61A1P61619 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SEC61A1P61619 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
SEC61A1P61619 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.14■□□□□ 0.81
SEC61A1P61619 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A1P61619 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A1P61619 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.14■□□□□ 0.81
SEC61A1P61619 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A1P61619 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.14■□□□□ 0.81
SEC61A1P61619 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SEC61A1P61619 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SEC61A1P61619 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A1P61619 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A1P61619 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A1P61619 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SEC61A1P61619 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SEC61A1P61619 BHLHE23-202ENST00000612929 1109 ntBASIC20.13■□□□□ 0.81
SEC61A1P61619 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SEC61A1P61619 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.12■□□□□ 0.81
SEC61A1P61619 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SEC61A1P61619 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.12■□□□□ 0.81
SEC61A1P61619 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SEC61A1P61619 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SEC61A1P61619 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A1P61619 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
SEC61A1P61619 AC010980.1-201ENST00000587192 1142 ntBASIC20.11■□□□□ 0.81
SEC61A1P61619 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A1P61619 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.11■□□□□ 0.81
SEC61A1P61619 AC097639.1-201ENST00000565519 1891 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 909.3 ms