Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH11P55287 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.26■□□□□ 0.99
CDH11P55287 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CDH11P55287 AC129492.7-201ENST00000622992 756 ntBASIC21.26■□□□□ 0.99
CDH11P55287 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH11P55287 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH11P55287 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH11P55287 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH11P55287 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH11P55287 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH11P55287 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH11P55287 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH11P55287 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH11P55287 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH11P55287 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH11P55287 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH11P55287 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH11P55287 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH11P55287 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CDH11P55287 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH11P55287 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH11P55287 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH11P55287 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH11P55287 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH11P55287 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
CDH11P55287 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH11P55287 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH11P55287 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH11P55287 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH11P55287 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDH11P55287 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.24■□□□□ 0.99
CDH11P55287 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CDH11P55287 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CDH11P55287 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH11P55287 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH11P55287 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH11P55287 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH11P55287 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDH11P55287 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH11P55287 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CDH11P55287 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH11P55287 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CDH11P55287 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH11P55287 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDH11P55287 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH11P55287 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH11P55287 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH11P55287 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH11P55287 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDH11P55287 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH11P55287 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH11P55287 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH11P55287 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH11P55287 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH11P55287 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.21■□□□□ 0.99
CDH11P55287 DUX4L18-201ENST00000553347 1267 ntBASIC21.21■□□□□ 0.99
CDH11P55287 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 AC012676.1-201ENST00000574705 1949 ntBASIC21.21■□□□□ 0.99
CDH11P55287 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH11P55287 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH11P55287 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH11P55287 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH11P55287 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH11P55287 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH11P55287 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH11P55287 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH11P55287 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH11P55287 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH11P55287 RAP2CP1-202ENST00000605179 643 ntBASIC21.19■□□□□ 0.98
CDH11P55287 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH11P55287 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDH11P55287 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CDH11P55287 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH11P55287 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH11P55287 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH11P55287 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.18■□□□□ 0.98
CDH11P55287 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH11P55287 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH11P55287 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH11P55287 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDH11P55287 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.17■□□□□ 0.98
CDH11P55287 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.17■□□□□ 0.98
CDH11P55287 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH11P55287 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH11P55287 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CDH11P55287 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDH11P55287 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH11P55287 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH11P55287 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH11P55287 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH11P55287 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH11P55287 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH11P55287 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms