Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPT1AP50416 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPT1AP50416 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.18■■□□□ 1.78
CPT1AP50416 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.18■■□□□ 1.78
CPT1AP50416 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CPT1AP50416 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CPT1AP50416 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CPT1AP50416 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
CPT1AP50416 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.17■■□□□ 1.78
CPT1AP50416 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CPT1AP50416 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CPT1AP50416 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPT1AP50416 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPT1AP50416 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPT1AP50416 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.16■■□□□ 1.78
CPT1AP50416 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CPT1AP50416 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
CPT1AP50416 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
CPT1AP50416 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPT1AP50416 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.15■■□□□ 1.78
CPT1AP50416 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPT1AP50416 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.15■■□□□ 1.78
CPT1AP50416 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CPT1AP50416 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CPT1AP50416 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CPT1AP50416 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CPT1AP50416 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CPT1AP50416 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CPT1AP50416 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CPT1AP50416 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.13■■□□□ 1.77
CPT1AP50416 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.13■■□□□ 1.77
CPT1AP50416 AC010501.1-201ENST00000606270 1962 ntBASIC26.13■■□□□ 1.77
CPT1AP50416 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CPT1AP50416 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.12■■□□□ 1.77
CPT1AP50416 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC26.12■■□□□ 1.77
CPT1AP50416 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CPT1AP50416 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.12■■□□□ 1.77
CPT1AP50416 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.12■■□□□ 1.77
CPT1AP50416 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CPT1AP50416 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.11■■□□□ 1.77
CPT1AP50416 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.11■■□□□ 1.77
CPT1AP50416 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.11■■□□□ 1.77
CPT1AP50416 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.11■■□□□ 1.77
CPT1AP50416 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CPT1AP50416 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CPT1AP50416 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.1■■□□□ 1.77
CPT1AP50416 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.1■■□□□ 1.77
CPT1AP50416 AC106739.1-201ENST00000617035 715 ntBASIC26.1■■□□□ 1.77
CPT1AP50416 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.1■■□□□ 1.77
CPT1AP50416 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CPT1AP50416 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
CPT1AP50416 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CPT1AP50416 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
CPT1AP50416 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.09■■□□□ 1.77
CPT1AP50416 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.09■■□□□ 1.77
CPT1AP50416 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CPT1AP50416 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CPT1AP50416 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CPT1AP50416 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CPT1AP50416 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CPT1AP50416 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CPT1AP50416 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CPT1AP50416 PBX2P1-201ENST00000493219 1291 ntBASIC26.08■■□□□ 1.77
CPT1AP50416 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
CPT1AP50416 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.08■■□□□ 1.76
CPT1AP50416 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CPT1AP50416 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.07■■□□□ 1.76
CPT1AP50416 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.07■■□□□ 1.76
CPT1AP50416 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPT1AP50416 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CPT1AP50416 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.07■■□□□ 1.76
CPT1AP50416 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPT1AP50416 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CPT1AP50416 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.06■■□□□ 1.76
CPT1AP50416 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.06■■□□□ 1.76
CPT1AP50416 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
CPT1AP50416 AC004448.1-201ENST00000458332 883 ntBASIC26.06■■□□□ 1.76
CPT1AP50416 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CPT1AP50416 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CPT1AP50416 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CPT1AP50416 SRD5A1P1-201ENST00000442297 786 ntBASIC26.05■■□□□ 1.76
CPT1AP50416 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CPT1AP50416 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CPT1AP50416 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.04■■□□□ 1.76
CPT1AP50416 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CPT1AP50416 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CPT1AP50416 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.04■■□□□ 1.76
CPT1AP50416 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CPT1AP50416 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
CPT1AP50416 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CPT1AP50416 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
CPT1AP50416 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.03■■□□□ 1.76
CPT1AP50416 UNC93B3-201ENST00000308076 687 ntBASIC26.03■■□□□ 1.76
CPT1AP50416 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.03■■□□□ 1.76
CPT1AP50416 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CPT1AP50416 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CPT1AP50416 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CPT1AP50416 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CPT1AP50416 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CPT1AP50416 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms