Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC35.59■■■■□ 3.29
KDM5CP41229 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
KDM5CP41229 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
KDM5CP41229 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC35.59■■■■□ 3.29
KDM5CP41229 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC35.59■■■■□ 3.29
KDM5CP41229 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC35.59■■■■□ 3.29
KDM5CP41229 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC35.59■■■■□ 3.29
KDM5CP41229 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC35.59■■■■□ 3.29
KDM5CP41229 GATM-206ENST00000558336 1522 ntTSL 2 BASIC35.58■■■■□ 3.29
KDM5CP41229 AC097381.1-201ENST00000429019 1296 ntBASIC35.58■■■■□ 3.29
KDM5CP41229 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC35.58■■■■□ 3.29
KDM5CP41229 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC35.58■■■■□ 3.29
KDM5CP41229 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC35.58■■■■□ 3.29
KDM5CP41229 SF1-220ENST00000626028 704 ntTSL 2 BASIC35.58■■■■□ 3.29
KDM5CP41229 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC35.58■■■■□ 3.29
KDM5CP41229 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC35.58■■■■□ 3.29
KDM5CP41229 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC35.58■■■■□ 3.29
KDM5CP41229 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
KDM5CP41229 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC35.57■■■■□ 3.28
KDM5CP41229 GRAMD4P4-201ENST00000613563 1115 ntBASIC35.57■■■■□ 3.28
KDM5CP41229 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
KDM5CP41229 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.28
KDM5CP41229 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
KDM5CP41229 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
KDM5CP41229 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC35.56■■■■□ 3.28
KDM5CP41229 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC35.56■■■■□ 3.28
KDM5CP41229 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
KDM5CP41229 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC35.56■■■■□ 3.28
KDM5CP41229 AC142086.6-201ENST00000621154 1765 ntBASIC35.55■■■■□ 3.28
KDM5CP41229 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
KDM5CP41229 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
KDM5CP41229 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC35.55■■■■□ 3.28
KDM5CP41229 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
KDM5CP41229 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
KDM5CP41229 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC35.54■■■■□ 3.28
KDM5CP41229 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC35.54■■■■□ 3.28
KDM5CP41229 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC35.54■■■■□ 3.28
KDM5CP41229 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC35.54■■■■□ 3.28
KDM5CP41229 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC35.53■■■■□ 3.28
KDM5CP41229 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
KDM5CP41229 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC35.53■■■■□ 3.28
KDM5CP41229 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC35.52■■■■□ 3.28
KDM5CP41229 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC35.51■■■■□ 3.28
KDM5CP41229 HYI-206ENST00000372434 1025 ntTSL 5 BASIC35.51■■■■□ 3.27
KDM5CP41229 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC35.51■■■■□ 3.27
KDM5CP41229 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC35.5■■■■□ 3.27
KDM5CP41229 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
KDM5CP41229 AC091305.1-201ENST00000479476 895 ntBASIC35.5■■■■□ 3.27
KDM5CP41229 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC35.5■■■■□ 3.27
KDM5CP41229 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC35.5■■■■□ 3.27
KDM5CP41229 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC35.49■■■■□ 3.27
KDM5CP41229 AC090877.2-201ENST00000558441 1738 ntBASIC35.48■■■■□ 3.27
KDM5CP41229 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC35.48■■■■□ 3.27
KDM5CP41229 AL162430.1-201ENST00000480705 870 ntBASIC35.48■■■■□ 3.27
KDM5CP41229 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC35.48■■■■□ 3.27
KDM5CP41229 PLD4-205ENST00000553861 667 ntTSL 2 BASIC35.48■■■■□ 3.27
KDM5CP41229 AC087623.3-201ENST00000607047 1098 ntBASIC35.48■■■■□ 3.27
KDM5CP41229 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC35.48■■■■□ 3.27
KDM5CP41229 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC35.48■■■■□ 3.27
KDM5CP41229 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC35.47■■■■□ 3.27
KDM5CP41229 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
KDM5CP41229 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC35.47■■■■□ 3.27
KDM5CP41229 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
KDM5CP41229 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
KDM5CP41229 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
KDM5CP41229 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
KDM5CP41229 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
KDM5CP41229 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC35.45■■■■□ 3.27
KDM5CP41229 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC35.45■■■■□ 3.26
KDM5CP41229 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
KDM5CP41229 LBH-205ENST00000407930 756 ntTSL 2 BASIC35.44■■■■□ 3.26
KDM5CP41229 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
KDM5CP41229 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC35.44■■■■□ 3.26
KDM5CP41229 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC35.44■■■■□ 3.26
KDM5CP41229 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC35.43■■■■□ 3.26
KDM5CP41229 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
KDM5CP41229 PARL-206ENST00000435888 1098 ntTSL 5 BASIC35.42■■■■□ 3.26
KDM5CP41229 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
KDM5CP41229 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC35.42■■■■□ 3.26
KDM5CP41229 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
KDM5CP41229 PTMA-205ENST00000410064 814 ntTSL 2 BASIC35.42■■■■□ 3.26
KDM5CP41229 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC35.42■■■■□ 3.26
KDM5CP41229 MIR4767-201ENST00000582827 78 ntBASIC35.42■■■■□ 3.26
KDM5CP41229 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
KDM5CP41229 RBM38-205ENST00000440234 686 ntTSL 2 BASIC35.41■■■■□ 3.26
KDM5CP41229 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC35.41■■■■□ 3.26
KDM5CP41229 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC35.41■■■■□ 3.26
KDM5CP41229 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC35.41■■■■□ 3.26
KDM5CP41229 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC35.41■■■■□ 3.26
KDM5CP41229 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC35.41■■■■□ 3.26
KDM5CP41229 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
KDM5CP41229 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
KDM5CP41229 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC35.4■■■■□ 3.26
KDM5CP41229 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC35.39■■■■□ 3.26
KDM5CP41229 DUX4L19-201ENST00000557448 1267 ntBASIC35.39■■■■□ 3.26
KDM5CP41229 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
KDM5CP41229 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.39■■■■□ 3.26
KDM5CP41229 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC35.38■■■■□ 3.25
KDM5CP41229 STOX2-205ENST00000513034 807 ntTSL 3 BASIC35.38■■■■□ 3.25
KDM5CP41229 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC35.38■■■■□ 3.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms