Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.46■■□□□ 1.51
SCNN1AP37088 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCNN1AP37088 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.46■■□□□ 1.51
SCNN1AP37088 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SCNN1AP37088 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.45■■□□□ 1.5
SCNN1AP37088 AC120024.1-201ENST00000562672 995 ntBASIC24.45■■□□□ 1.5
SCNN1AP37088 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.45■■□□□ 1.5
SCNN1AP37088 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCNN1AP37088 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.45■■□□□ 1.5
SCNN1AP37088 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCNN1AP37088 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.44■■□□□ 1.5
SCNN1AP37088 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCNN1AP37088 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCNN1AP37088 YBX1P4-201ENST00000392794 808 ntBASIC24.44■■□□□ 1.5
SCNN1AP37088 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCNN1AP37088 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.44■■□□□ 1.5
SCNN1AP37088 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCNN1AP37088 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.44■■□□□ 1.5
SCNN1AP37088 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCNN1AP37088 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCNN1AP37088 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCNN1AP37088 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.43■■□□□ 1.5
SCNN1AP37088 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.43■■□□□ 1.5
SCNN1AP37088 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCNN1AP37088 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SCNN1AP37088 THA1P-201ENST00000590384 1145 ntBASIC24.42■■□□□ 1.5
SCNN1AP37088 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCNN1AP37088 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SCNN1AP37088 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SCNN1AP37088 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.42■■□□□ 1.5
SCNN1AP37088 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCNN1AP37088 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCNN1AP37088 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.41■■□□□ 1.5
SCNN1AP37088 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.41■■□□□ 1.5
SCNN1AP37088 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SCNN1AP37088 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.41■■□□□ 1.5
SCNN1AP37088 HLA-L-211ENST00000482052 1765 ntBASIC24.41■■□□□ 1.5
SCNN1AP37088 AC141586.4-201ENST00000624558 1573 ntBASIC24.41■■□□□ 1.5
SCNN1AP37088 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCNN1AP37088 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCNN1AP37088 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCNN1AP37088 AC103724.3-201ENST00000564481 992 ntBASIC24.4■■□□□ 1.5
SCNN1AP37088 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.4■■□□□ 1.5
SCNN1AP37088 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCNN1AP37088 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.4■■□□□ 1.5
SCNN1AP37088 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCNN1AP37088 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SCNN1AP37088 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCNN1AP37088 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.39■■□□□ 1.49
SCNN1AP37088 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCNN1AP37088 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCNN1AP37088 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCNN1AP37088 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCNN1AP37088 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.38■■□□□ 1.49
SCNN1AP37088 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCNN1AP37088 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
SCNN1AP37088 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCNN1AP37088 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCNN1AP37088 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.38■■□□□ 1.49
SCNN1AP37088 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCNN1AP37088 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
SCNN1AP37088 KRT8P33-201ENST00000508125 1423 ntBASIC24.37■■□□□ 1.49
SCNN1AP37088 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.37■■□□□ 1.49
SCNN1AP37088 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SCNN1AP37088 MIR4281-201ENST00000580852 62 ntBASIC24.37■■□□□ 1.49
SCNN1AP37088 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCNN1AP37088 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.37■■□□□ 1.49
SCNN1AP37088 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCNN1AP37088 LINC00543-201ENST00000567234 1845 ntBASIC24.36■■□□□ 1.49
SCNN1AP37088 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
SCNN1AP37088 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCNN1AP37088 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.36■■□□□ 1.49
SCNN1AP37088 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.36■■□□□ 1.49
SCNN1AP37088 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCNN1AP37088 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCNN1AP37088 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCNN1AP37088 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCNN1AP37088 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.35■■□□□ 1.49
SCNN1AP37088 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SCNN1AP37088 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SCNN1AP37088 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.34■■□□□ 1.49
SCNN1AP37088 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SCNN1AP37088 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCNN1AP37088 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCNN1AP37088 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
SCNN1AP37088 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SCNN1AP37088 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SCNN1AP37088 AL161729.1-201ENST00000604104 1402 ntBASIC24.33■■□□□ 1.49
SCNN1AP37088 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.33■■□□□ 1.49
SCNN1AP37088 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
SCNN1AP37088 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
SCNN1AP37088 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCNN1AP37088 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.32■■□□□ 1.48
SCNN1AP37088 AL031848.2-201ENST00000607670 837 ntBASIC24.32■■□□□ 1.48
SCNN1AP37088 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SCNN1AP37088 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCNN1AP37088 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SCNN1AP37088 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SCNN1AP37088 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
SCNN1AP37088 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms