Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CKS2P33552 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS2P33552 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.11■□□□□ 0.33
CKS2P33552 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CKS2P33552 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS2P33552 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS2P33552 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CKS2P33552 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS2P33552 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CKS2P33552 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
CKS2P33552 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CKS2P33552 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS2P33552 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS2P33552 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CKS2P33552 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CKS2P33552 AL117328.2-201ENST00000624617 1940 ntBASIC17.09■□□□□ 0.33
CKS2P33552 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.09■□□□□ 0.33
CKS2P33552 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKS2P33552 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS2P33552 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKS2P33552 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKS2P33552 DUX4L28-201ENST00000623687 678 ntBASIC17.09■□□□□ 0.33
CKS2P33552 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CKS2P33552 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CKS2P33552 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKS2P33552 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CKS2P33552 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.08■□□□□ 0.33
CKS2P33552 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CKS2P33552 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CKS2P33552 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS2P33552 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CKS2P33552 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS2P33552 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS2P33552 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS2P33552 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS2P33552 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CKS2P33552 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
CKS2P33552 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.07■□□□□ 0.32
CKS2P33552 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS2P33552 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS2P33552 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.07■□□□□ 0.32
CKS2P33552 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS2P33552 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CKS2P33552 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CKS2P33552 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.07■□□□□ 0.32
CKS2P33552 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CKS2P33552 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.07■□□□□ 0.32
CKS2P33552 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CKS2P33552 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS2P33552 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CKS2P33552 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS2P33552 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS2P33552 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CKS2P33552 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS2P33552 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS2P33552 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS2P33552 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CKS2P33552 AL359504.2-201ENST00000605506 1601 ntBASIC17.05■□□□□ 0.32
CKS2P33552 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CKS2P33552 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.05■□□□□ 0.32
CKS2P33552 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CKS2P33552 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.04■□□□□ 0.32
CKS2P33552 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.04■□□□□ 0.32
CKS2P33552 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS2P33552 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CKS2P33552 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CKS2P33552 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CKS2P33552 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS2P33552 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.04■□□□□ 0.32
CKS2P33552 MIR3665-201ENST00000578708 105 ntBASIC17.04■□□□□ 0.32
CKS2P33552 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CKS2P33552 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.04■□□□□ 0.32
CKS2P33552 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS2P33552 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CKS2P33552 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.04■□□□□ 0.32
CKS2P33552 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.04■□□□□ 0.32
CKS2P33552 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CKS2P33552 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS2P33552 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CKS2P33552 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CKS2P33552 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS2P33552 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
CKS2P33552 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CKS2P33552 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS2P33552 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CKS2P33552 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CKS2P33552 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CKS2P33552 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.02■□□□□ 0.32
CKS2P33552 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.02■□□□□ 0.32
CKS2P33552 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.02■□□□□ 0.32
CKS2P33552 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CKS2P33552 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CKS2P33552 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.02■□□□□ 0.31
CKS2P33552 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKS2P33552 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.31
CKS2P33552 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKS2P33552 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.02■□□□□ 0.31
CKS2P33552 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
CKS2P33552 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CKS2P33552 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms