Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
GDF1P27539 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF1P27539 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
GDF1P27539 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDF1P27539 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDF1P27539 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.2■□□□□ 0.98
GDF1P27539 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
GDF1P27539 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF1P27539 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF1P27539 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF1P27539 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDF1P27539 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF1P27539 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
GDF1P27539 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GDF1P27539 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.19■□□□□ 0.98
GDF1P27539 KRT16P3-201ENST00000439127 1283 ntBASIC21.19■□□□□ 0.98
GDF1P27539 UNC93B8-201ENST00000511903 705 ntBASIC21.19■□□□□ 0.98
GDF1P27539 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.19■□□□□ 0.98
GDF1P27539 AC092028.1-203ENST00000608262 953 ntBASIC21.19■□□□□ 0.98
GDF1P27539 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
GDF1P27539 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.18■□□□□ 0.98
GDF1P27539 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
GDF1P27539 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.18■□□□□ 0.98
GDF1P27539 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.18■□□□□ 0.98
GDF1P27539 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
GDF1P27539 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GDF1P27539 AF131216.4-201ENST00000638924 1588 ntBASIC21.18■□□□□ 0.98
GDF1P27539 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.17■□□□□ 0.98
GDF1P27539 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.17■□□□□ 0.98
GDF1P27539 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GDF1P27539 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GDF1P27539 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.16■□□□□ 0.98
GDF1P27539 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.16■□□□□ 0.98
GDF1P27539 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GDF1P27539 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF1P27539 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.16■□□□□ 0.98
GDF1P27539 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.16■□□□□ 0.98
GDF1P27539 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GDF1P27539 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.15■□□□□ 0.98
GDF1P27539 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
GDF1P27539 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF1P27539 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.15■□□□□ 0.98
GDF1P27539 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GDF1P27539 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GDF1P27539 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
GDF1P27539 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GDF1P27539 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.14■□□□□ 0.98
GDF1P27539 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
GDF1P27539 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GDF1P27539 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.14■□□□□ 0.97
GDF1P27539 MTDHP2-201ENST00000601468 714 ntBASIC21.14■□□□□ 0.97
GDF1P27539 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.14■□□□□ 0.97
GDF1P27539 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF1P27539 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GDF1P27539 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GDF1P27539 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF1P27539 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GDF1P27539 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
GDF1P27539 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.13■□□□□ 0.97
GDF1P27539 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GDF1P27539 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
GDF1P27539 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.12■□□□□ 0.97
GDF1P27539 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.12■□□□□ 0.97
GDF1P27539 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF1P27539 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.12■□□□□ 0.97
GDF1P27539 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF1P27539 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.12■□□□□ 0.97
GDF1P27539 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.12■□□□□ 0.97
GDF1P27539 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.12■□□□□ 0.97
GDF1P27539 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF1P27539 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.12■□□□□ 0.97
GDF1P27539 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GDF1P27539 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GDF1P27539 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GDF1P27539 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.11■□□□□ 0.97
GDF1P27539 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.11■□□□□ 0.97
GDF1P27539 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GDF1P27539 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
GDF1P27539 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GDF1P27539 AC010997.5-201ENST00000609182 354 ntBASIC21.1■□□□□ 0.97
GDF1P27539 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.1■□□□□ 0.97
GDF1P27539 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GDF1P27539 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDF1P27539 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
GDF1P27539 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF1P27539 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF1P27539 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDF1P27539 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF1P27539 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GDF1P27539 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GDF1P27539 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms