Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 DUX4L7-201ENST00000630678 1275 ntBASIC19.32■□□□□ 0.68
NF1P21359 DUX4L5-201ENST00000630834 1275 ntBASIC19.32■□□□□ 0.68
NF1P21359 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.31■□□□□ 0.68
NF1P21359 AC008764.7-201ENST00000593779 1081 ntBASIC19.31■□□□□ 0.68
NF1P21359 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NF1P21359 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.31■□□□□ 0.68
NF1P21359 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.3■□□□□ 0.68
NF1P21359 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
NF1P21359 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NF1P21359 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NF1P21359 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.3■□□□□ 0.68
NF1P21359 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.3■□□□□ 0.68
NF1P21359 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NF1P21359 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.3■□□□□ 0.68
NF1P21359 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NF1P21359 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.3■□□□□ 0.68
NF1P21359 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
NF1P21359 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.29■□□□□ 0.68
NF1P21359 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.29■□□□□ 0.68
NF1P21359 AC104771.1-201ENST00000603335 964 ntBASIC19.29■□□□□ 0.68
NF1P21359 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NF1P21359 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
NF1P21359 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NF1P21359 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NF1P21359 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NF1P21359 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.29■□□□□ 0.68
NF1P21359 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NF1P21359 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.29■□□□□ 0.68
NF1P21359 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NF1P21359 BX255925.1-201ENST00000566954 1854 ntBASIC19.28■□□□□ 0.68
NF1P21359 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NF1P21359 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NF1P21359 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NF1P21359 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.27■□□□□ 0.68
NF1P21359 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NF1P21359 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NF1P21359 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NF1P21359 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NF1P21359 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.27■□□□□ 0.68
NF1P21359 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.27■□□□□ 0.68
NF1P21359 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.27■□□□□ 0.68
NF1P21359 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NF1P21359 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.27■□□□□ 0.67
NF1P21359 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.27■□□□□ 0.67
NF1P21359 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.27■□□□□ 0.67
NF1P21359 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.27■□□□□ 0.67
NF1P21359 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NF1P21359 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NF1P21359 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.27■□□□□ 0.67
NF1P21359 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
NF1P21359 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.26■□□□□ 0.67
NF1P21359 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
NF1P21359 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NF1P21359 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NF1P21359 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NF1P21359 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NF1P21359 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NF1P21359 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.25■□□□□ 0.67
NF1P21359 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NF1P21359 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NF1P21359 AC004448.1-201ENST00000458332 883 ntBASIC19.25■□□□□ 0.67
NF1P21359 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NF1P21359 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.25■□□□□ 0.67
NF1P21359 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NF1P21359 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NF1P21359 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NF1P21359 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NF1P21359 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NF1P21359 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.24■□□□□ 0.67
NF1P21359 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.24■□□□□ 0.67
NF1P21359 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NF1P21359 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.24■□□□□ 0.67
NF1P21359 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.24■□□□□ 0.67
NF1P21359 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NF1P21359 AF131216.4-201ENST00000638924 1588 ntBASIC19.24■□□□□ 0.67
NF1P21359 KRT18P10-201ENST00000388836 1287 ntBASIC19.24■□□□□ 0.67
NF1P21359 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.24■□□□□ 0.67
NF1P21359 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NF1P21359 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NF1P21359 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NF1P21359 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NF1P21359 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NF1P21359 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
NF1P21359 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NF1P21359 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NF1P21359 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.21■□□□□ 0.67
NF1P21359 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
NF1P21359 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.21■□□□□ 0.67
NF1P21359 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NF1P21359 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.21■□□□□ 0.67
NF1P21359 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NF1P21359 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NF1P21359 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NF1P21359 TSPY20P-201ENST00000450910 630 ntBASIC19.2■□□□□ 0.66
NF1P21359 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.2■□□□□ 0.66
NF1P21359 AL449106.1-201ENST00000608517 1980 ntBASIC19.2■□□□□ 0.66
NF1P21359 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NF1P21359 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NF1P21359 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.2■□□□□ 0.66
NF1P21359 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms