Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB40ALP0C0E4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.05■■□□□ 1.12
RAB40ALP0C0E4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAB40ALP0C0E4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB40ALP0C0E4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.05■■□□□ 1.12
RAB40ALP0C0E4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB40ALP0C0E4 AC096887.2-201ENST00000623443 1957 ntBASIC22.05■■□□□ 1.12
RAB40ALP0C0E4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 MIR3621-201ENST00000580529 85 ntBASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 AL117332.1-201ENST00000622628 974 ntBASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.04■■□□□ 1.12
RAB40ALP0C0E4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.03■■□□□ 1.12
RAB40ALP0C0E4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RAB40ALP0C0E4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 AC010501.1-201ENST00000606270 1962 ntBASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 AL356740.2-201ENST00000601559 647 ntBASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.02■■□□□ 1.12
RAB40ALP0C0E4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.02■■□□□ 1.11
RAB40ALP0C0E4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 ERN1-208ENST00000606895 2068 ntBASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAB40ALP0C0E4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RAB40ALP0C0E4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAB40ALP0C0E4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22■■□□□ 1.11
RAB40ALP0C0E4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22■■□□□ 1.11
RAB40ALP0C0E4 AC131281.2-201ENST00000520478 145 ntBASIC22■■□□□ 1.11
RAB40ALP0C0E4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RAB40ALP0C0E4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RAB40ALP0C0E4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RAB40ALP0C0E4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB40ALP0C0E4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAB40ALP0C0E4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.98■■□□□ 1.11
RAB40ALP0C0E4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAB40ALP0C0E4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAB40ALP0C0E4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAB40ALP0C0E4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40ALP0C0E4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40ALP0C0E4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40ALP0C0E4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40ALP0C0E4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.96■■□□□ 1.11
RAB40ALP0C0E4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40ALP0C0E4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
RAB40ALP0C0E4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAB40ALP0C0E4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAB40ALP0C0E4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAB40ALP0C0E4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
RAB40ALP0C0E4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.95■■□□□ 1.1
RAB40ALP0C0E4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RAB40ALP0C0E4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.95■■□□□ 1.1
RAB40ALP0C0E4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 AL136116.3-201ENST00000402907 1138 ntBASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 SNX5-217ENST00000606557 1087 ntBASIC21.94■■□□□ 1.1
RAB40ALP0C0E4 MIR6722-201ENST00000617286 78 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms