Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.95■■□□□ 1.42
COL4A2P08572 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.95■■□□□ 1.42
COL4A2P08572 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A2P08572 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A2P08572 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.95■■□□□ 1.42
COL4A2P08572 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A2P08572 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A2P08572 PBX2P1-201ENST00000493219 1291 ntBASIC23.95■■□□□ 1.42
COL4A2P08572 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.95■■□□□ 1.42
COL4A2P08572 AC135279.3-201ENST00000610945 1311 ntBASIC23.95■■□□□ 1.42
COL4A2P08572 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL4A2P08572 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A2P08572 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.94■■□□□ 1.42
COL4A2P08572 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A2P08572 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
COL4A2P08572 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.94■■□□□ 1.42
COL4A2P08572 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.94■■□□□ 1.42
COL4A2P08572 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A2P08572 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A2P08572 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL4A2P08572 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A2P08572 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.93■■□□□ 1.42
COL4A2P08572 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
COL4A2P08572 UNC93B3-201ENST00000308076 687 ntBASIC23.93■■□□□ 1.42
COL4A2P08572 AC142381.2-201ENST00000566120 298 ntBASIC23.93■■□□□ 1.42
COL4A2P08572 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A2P08572 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
COL4A2P08572 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A2P08572 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
COL4A2P08572 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A2P08572 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A2P08572 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL4A2P08572 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
COL4A2P08572 AC024257.2-201ENST00000549699 147 ntBASIC23.93■■□□□ 1.42
COL4A2P08572 AL136162.1-201ENST00000607711 1078 ntBASIC23.93■■□□□ 1.42
COL4A2P08572 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.93■■□□□ 1.42
COL4A2P08572 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A2P08572 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A2P08572 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.92■■□□□ 1.42
COL4A2P08572 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL4A2P08572 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.92■■□□□ 1.42
COL4A2P08572 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.92■■□□□ 1.42
COL4A2P08572 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A2P08572 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A2P08572 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A2P08572 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
COL4A2P08572 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
COL4A2P08572 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A2P08572 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL4A2P08572 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
COL4A2P08572 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
COL4A2P08572 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.9■■□□□ 1.42
COL4A2P08572 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.9■■□□□ 1.42
COL4A2P08572 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.9■■□□□ 1.42
COL4A2P08572 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.9■■□□□ 1.42
COL4A2P08572 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A2P08572 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A2P08572 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL4A2P08572 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.9■■□□□ 1.42
COL4A2P08572 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
COL4A2P08572 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
COL4A2P08572 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL4A2P08572 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.89■■□□□ 1.42
COL4A2P08572 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
COL4A2P08572 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.89■■□□□ 1.42
COL4A2P08572 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
COL4A2P08572 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
COL4A2P08572 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.89■■□□□ 1.41
COL4A2P08572 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
COL4A2P08572 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
COL4A2P08572 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A2P08572 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL4A2P08572 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A2P08572 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A2P08572 AP001330.3-201ENST00000520123 633 ntBASIC23.87■■□□□ 1.41
COL4A2P08572 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
COL4A2P08572 ERN1-208ENST00000606895 2068 ntBASIC23.87■■□□□ 1.41
COL4A2P08572 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
COL4A2P08572 EDA-201ENST00000338901 1233 ntBASIC23.87■■□□□ 1.41
COL4A2P08572 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL4A2P08572 AC097639.1-201ENST00000565519 1891 ntBASIC23.86■■□□□ 1.41
COL4A2P08572 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL4A2P08572 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.86■■□□□ 1.41
COL4A2P08572 AC105265.2-201ENST00000467189 838 ntBASIC23.86■■□□□ 1.41
COL4A2P08572 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.86■■□□□ 1.41
COL4A2P08572 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.85■■□□□ 1.41
COL4A2P08572 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.85■■□□□ 1.41
COL4A2P08572 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.85■■□□□ 1.41
COL4A2P08572 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL4A2P08572 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.85■■□□□ 1.41
COL4A2P08572 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.84■■□□□ 1.41
COL4A2P08572 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.84■■□□□ 1.41
COL4A2P08572 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
COL4A2P08572 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL4A2P08572 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
COL4A2P08572 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.84■■□□□ 1.41
COL4A2P08572 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.84■■□□□ 1.41
COL4A2P08572 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.84■■□□□ 1.41
COL4A2P08572 MIR939-201ENST00000401314 82 ntBASIC23.83■■□□□ 1.41
COL4A2P08572 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms