Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 AL139125.2-201ENST00000623134 1869 ntBASIC19.63■□□□□ 0.73
TFF1P04155 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TFF1P04155 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.63■□□□□ 0.73
TFF1P04155 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.63■□□□□ 0.73
TFF1P04155 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TFF1P04155 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
TFF1P04155 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.62■□□□□ 0.73
TFF1P04155 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.62■□□□□ 0.73
TFF1P04155 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.62■□□□□ 0.73
TFF1P04155 AC103834.1-201ENST00000520383 144 ntBASIC19.62■□□□□ 0.73
TFF1P04155 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.62■□□□□ 0.73
TFF1P04155 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.61■□□□□ 0.73
TFF1P04155 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TFF1P04155 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TFF1P04155 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TFF1P04155 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.61■□□□□ 0.73
TFF1P04155 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.6■□□□□ 0.73
TFF1P04155 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 AL592295.1-201ENST00000400984 884 ntBASIC19.6■□□□□ 0.73
TFF1P04155 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 MIR6089-201ENST00000616698 64 ntBASIC19.6■□□□□ 0.73
TFF1P04155 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.6■□□□□ 0.73
TFF1P04155 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TFF1P04155 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 LINC01124-201ENST00000409786 2117 ntBASIC19.59■□□□□ 0.73
TFF1P04155 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.59■□□□□ 0.73
TFF1P04155 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TFF1P04155 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.58■□□□□ 0.72
TFF1P04155 AP003733.4-201ENST00000623785 1697 ntBASIC19.58■□□□□ 0.72
TFF1P04155 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.58■□□□□ 0.72
TFF1P04155 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TFF1P04155 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TFF1P04155 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.57■□□□□ 0.72
TFF1P04155 AC019171.1-201ENST00000601251 1056 ntBASIC19.57■□□□□ 0.72
TFF1P04155 HLA-L-211ENST00000482052 1765 ntBASIC19.57■□□□□ 0.72
TFF1P04155 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.56■□□□□ 0.72
TFF1P04155 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.56■□□□□ 0.72
TFF1P04155 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TFF1P04155 AC074183.2-201ENST00000623112 922 ntBASIC19.56■□□□□ 0.72
TFF1P04155 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TFF1P04155 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.56■□□□□ 0.72
TFF1P04155 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TFF1P04155 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TFF1P04155 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TFF1P04155 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TFF1P04155 AC090877.2-201ENST00000558441 1738 ntBASIC19.54■□□□□ 0.72
TFF1P04155 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.54■□□□□ 0.72
TFF1P04155 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TFF1P04155 AC093323.1-202ENST00000635031 2045 ntBASIC19.54■□□□□ 0.72
TFF1P04155 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TFF1P04155 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TFF1P04155 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
TFF1P04155 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TFF1P04155 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 RARRES2P1-201ENST00000474487 481 ntBASIC19.53■□□□□ 0.72
TFF1P04155 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.53■□□□□ 0.72
TFF1P04155 AC120024.1-201ENST00000562672 995 ntBASIC19.53■□□□□ 0.72
TFF1P04155 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.53■□□□□ 0.72
TFF1P04155 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.53■□□□□ 0.72
TFF1P04155 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TFF1P04155 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TFF1P04155 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TFF1P04155 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.52■□□□□ 0.72
TFF1P04155 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TFF1P04155 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TFF1P04155 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms