Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 LINC00526-201ENST00000581067 1875 ntBASIC20.21■□□□□ 0.83
HLA-DQB1P01920 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQB1P01920 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB1P01920 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB1P01920 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DQB1P01920 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB1P01920 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB1P01920 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQB1P01920 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQB1P01920 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 C1orf229-201ENST00000623686 2258 ntBASIC20.18■□□□□ 0.82
HLA-DQB1P01920 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.18■□□□□ 0.82
HLA-DQB1P01920 MIR219A2-201ENST00000608502 1504 ntBASIC20.17■□□□□ 0.82
HLA-DQB1P01920 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 AL359258.2-201ENST00000564063 1566 ntBASIC20.17■□□□□ 0.82
HLA-DQB1P01920 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.17■□□□□ 0.82
HLA-DQB1P01920 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.16■□□□□ 0.82
HLA-DQB1P01920 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.15■□□□□ 0.82
HLA-DQB1P01920 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB1P01920 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB1P01920 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HLA-DQB1P01920 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB1P01920 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HLA-DQB1P01920 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB1P01920 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB1P01920 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
HLA-DQB1P01920 MIR6089-201ENST00000616698 64 ntBASIC20.13■□□□□ 0.81
HLA-DQB1P01920 LINC01971-201ENST00000617888 1048 ntBASIC20.13■□□□□ 0.81
HLA-DQB1P01920 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HLA-DQB1P01920 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
HLA-DQB1P01920 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 AC148477.6-201ENST00000623746 465 ntBASIC20.12■□□□□ 0.81
HLA-DQB1P01920 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HLA-DQB1P01920 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB1P01920 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HLA-DQB1P01920 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB1P01920 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms