Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBE4BO95155 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UBE4BO95155 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.66■■□□□ 1.7
UBE4BO95155 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBE4BO95155 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBE4BO95155 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBE4BO95155 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
UBE4BO95155 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.65■■□□□ 1.7
UBE4BO95155 MIR4508-201ENST00000584178 70 ntBASIC25.65■■□□□ 1.7
UBE4BO95155 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBE4BO95155 AC141586.4-201ENST00000624558 1573 ntBASIC25.65■■□□□ 1.7
UBE4BO95155 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBE4BO95155 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC25.64■■□□□ 1.7
UBE4BO95155 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
UBE4BO95155 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.64■■□□□ 1.7
UBE4BO95155 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
UBE4BO95155 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
UBE4BO95155 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
UBE4BO95155 HLA-L-211ENST00000482052 1765 ntBASIC25.63■■□□□ 1.69
UBE4BO95155 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.63■■□□□ 1.69
UBE4BO95155 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBE4BO95155 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBE4BO95155 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.62■■□□□ 1.69
UBE4BO95155 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
UBE4BO95155 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBE4BO95155 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.62■■□□□ 1.69
UBE4BO95155 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBE4BO95155 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBE4BO95155 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.62■■□□□ 1.69
UBE4BO95155 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBE4BO95155 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
UBE4BO95155 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.61■■□□□ 1.69
UBE4BO95155 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBE4BO95155 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBE4BO95155 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.61■■□□□ 1.69
UBE4BO95155 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
UBE4BO95155 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBE4BO95155 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBE4BO95155 LINC00543-201ENST00000567234 1845 ntBASIC25.6■■□□□ 1.69
UBE4BO95155 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
UBE4BO95155 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
UBE4BO95155 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBE4BO95155 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.6■■□□□ 1.69
UBE4BO95155 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBE4BO95155 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.6■■□□□ 1.69
UBE4BO95155 LINC01124-201ENST00000409786 2117 ntBASIC25.59■■□□□ 1.69
UBE4BO95155 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBE4BO95155 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
UBE4BO95155 AC120024.1-201ENST00000562672 995 ntBASIC25.59■■□□□ 1.69
UBE4BO95155 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
UBE4BO95155 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.58■■□□□ 1.69
UBE4BO95155 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBE4BO95155 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBE4BO95155 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.58■■□□□ 1.69
UBE4BO95155 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.58■■□□□ 1.69
UBE4BO95155 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
UBE4BO95155 KRT18P24-201ENST00000344739 1156 ntBASIC25.58■■□□□ 1.69
UBE4BO95155 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBE4BO95155 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
UBE4BO95155 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.58■■□□□ 1.69
UBE4BO95155 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
UBE4BO95155 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
UBE4BO95155 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
UBE4BO95155 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
UBE4BO95155 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.57■■□□□ 1.68
UBE4BO95155 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.57■■□□□ 1.68
UBE4BO95155 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.57■■□□□ 1.68
UBE4BO95155 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
UBE4BO95155 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBE4BO95155 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBE4BO95155 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBE4BO95155 AC103834.1-201ENST00000520383 144 ntBASIC25.56■■□□□ 1.68
UBE4BO95155 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBE4BO95155 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
UBE4BO95155 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
UBE4BO95155 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBE4BO95155 THA1P-201ENST00000590384 1145 ntBASIC25.55■■□□□ 1.68
UBE4BO95155 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
UBE4BO95155 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 AC093323.1-202ENST00000635031 2045 ntBASIC25.54■■□□□ 1.68
UBE4BO95155 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.54■■□□□ 1.68
UBE4BO95155 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.54■■□□□ 1.68
UBE4BO95155 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.54■■□□□ 1.68
UBE4BO95155 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBE4BO95155 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.54■■□□□ 1.68
UBE4BO95155 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.53■■□□□ 1.68
UBE4BO95155 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
UBE4BO95155 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
UBE4BO95155 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
UBE4BO95155 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
UBE4BO95155 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
UBE4BO95155 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
UBE4BO95155 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
UBE4BO95155 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.53■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms