Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.93■□□□□ 0.62
SCAF4O95104 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.93■□□□□ 0.62
SCAF4O95104 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
SCAF4O95104 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCAF4O95104 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SCAF4O95104 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAF4O95104 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAF4O95104 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAF4O95104 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SCAF4O95104 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SCAF4O95104 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.93■□□□□ 0.62
SCAF4O95104 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SCAF4O95104 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.92■□□□□ 0.62
SCAF4O95104 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SCAF4O95104 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.92■□□□□ 0.62
SCAF4O95104 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.91■□□□□ 0.62
SCAF4O95104 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SCAF4O95104 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SCAF4O95104 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SCAF4O95104 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.91■□□□□ 0.62
SCAF4O95104 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.91■□□□□ 0.62
SCAF4O95104 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.91■□□□□ 0.62
SCAF4O95104 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCAF4O95104 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCAF4O95104 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCAF4O95104 AL359504.2-201ENST00000605506 1601 ntBASIC18.9■□□□□ 0.62
SCAF4O95104 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.9■□□□□ 0.62
SCAF4O95104 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCAF4O95104 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.9■□□□□ 0.62
SCAF4O95104 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCAF4O95104 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCAF4O95104 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SCAF4O95104 SLC6A10P-202ENST00000431994 2058 ntBASIC18.89■□□□□ 0.62
SCAF4O95104 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.62
SCAF4O95104 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCAF4O95104 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCAF4O95104 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.89■□□□□ 0.61
SCAF4O95104 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCAF4O95104 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCAF4O95104 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.89■□□□□ 0.61
SCAF4O95104 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SCAF4O95104 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCAF4O95104 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SCAF4O95104 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SCAF4O95104 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SCAF4O95104 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SCAF4O95104 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.88■□□□□ 0.61
SCAF4O95104 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.88■□□□□ 0.61
SCAF4O95104 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 AL359258.2-201ENST00000564063 1566 ntBASIC18.88■□□□□ 0.61
SCAF4O95104 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCAF4O95104 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SCAF4O95104 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SCAF4O95104 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SCAF4O95104 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.87■□□□□ 0.61
SCAF4O95104 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.87■□□□□ 0.61
SCAF4O95104 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.86■□□□□ 0.61
SCAF4O95104 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SCAF4O95104 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.86■□□□□ 0.61
SCAF4O95104 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SCAF4O95104 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SCAF4O95104 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.85■□□□□ 0.61
SCAF4O95104 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms