Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.02■■□□□ 1.44
RPP40O75818 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.02■■□□□ 1.44
RPP40O75818 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RPP40O75818 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPP40O75818 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPP40O75818 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPP40O75818 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.01■■□□□ 1.43
RPP40O75818 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.01■■□□□ 1.43
RPP40O75818 AC010997.5-201ENST00000609182 354 ntBASIC24.01■■□□□ 1.43
RPP40O75818 AL117332.1-201ENST00000622628 974 ntBASIC24.01■■□□□ 1.43
RPP40O75818 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RPP40O75818 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPP40O75818 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RPP40O75818 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
RPP40O75818 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24■■□□□ 1.43
RPP40O75818 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RPP40O75818 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPP40O75818 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RPP40O75818 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24■■□□□ 1.43
RPP40O75818 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24■■□□□ 1.43
RPP40O75818 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RPP40O75818 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
RPP40O75818 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPP40O75818 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RPP40O75818 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.99■■□□□ 1.43
RPP40O75818 MIR4281-201ENST00000580852 62 ntBASIC23.99■■□□□ 1.43
RPP40O75818 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.99■■□□□ 1.43
RPP40O75818 AC110285.6-201ENST00000617652 491 ntBASIC23.99■■□□□ 1.43
RPP40O75818 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RPP40O75818 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.99■■□□□ 1.43
RPP40O75818 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RPP40O75818 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP40O75818 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP40O75818 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP40O75818 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RPP40O75818 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RPP40O75818 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.98■■□□□ 1.43
RPP40O75818 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RPP40O75818 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPP40O75818 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
RPP40O75818 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RPP40O75818 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RPP40O75818 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
RPP40O75818 MIR3621-201ENST00000580529 85 ntBASIC23.97■■□□□ 1.43
RPP40O75818 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.97■■□□□ 1.43
RPP40O75818 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPP40O75818 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RPP40O75818 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.96■■□□□ 1.43
RPP40O75818 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RPP40O75818 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RPP40O75818 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RPP40O75818 MTDHP2-201ENST00000601468 714 ntBASIC23.96■■□□□ 1.43
RPP40O75818 AC005837.3-201ENST00000612163 286 ntBASIC23.96■■□□□ 1.43
RPP40O75818 MIR6724-1-201ENST00000616420 92 ntBASIC23.96■■□□□ 1.43
RPP40O75818 MIR6724-2-201ENST00000616483 92 ntBASIC23.96■■□□□ 1.43
RPP40O75818 MIR6724-4-201ENST00000617390 92 ntBASIC23.96■■□□□ 1.43
RPP40O75818 MIR6724-3-201ENST00000622482 92 ntBASIC23.96■■□□□ 1.43
RPP40O75818 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
RPP40O75818 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
RPP40O75818 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
RPP40O75818 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPP40O75818 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPP40O75818 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RPP40O75818 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
RPP40O75818 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.95■■□□□ 1.42
RPP40O75818 AL356740.2-201ENST00000601559 647 ntBASIC23.95■■□□□ 1.42
RPP40O75818 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
RPP40O75818 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.95■■□□□ 1.42
RPP40O75818 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPP40O75818 AC096631.2-201ENST00000436136 790 ntBASIC23.94■■□□□ 1.42
RPP40O75818 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPP40O75818 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.94■■□□□ 1.42
RPP40O75818 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPP40O75818 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RPP40O75818 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.94■■□□□ 1.42
RPP40O75818 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.93■■□□□ 1.42
RPP40O75818 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RPP40O75818 AC097639.1-201ENST00000565519 1891 ntBASIC23.93■■□□□ 1.42
RPP40O75818 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.93■■□□□ 1.42
RPP40O75818 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPP40O75818 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPP40O75818 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.92■■□□□ 1.42
RPP40O75818 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
RPP40O75818 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RPP40O75818 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.91■■□□□ 1.42
RPP40O75818 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPP40O75818 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.91■■□□□ 1.42
RPP40O75818 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPP40O75818 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.91■■□□□ 1.42
RPP40O75818 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPP40O75818 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.91■■□□□ 1.42
RPP40O75818 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RPP40O75818 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RPP40O75818 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RPP40O75818 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPP40O75818 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
RPP40O75818 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
RPP40O75818 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPP40O75818 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RPP40O75818 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms