Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.35■□□□□ 0.53
SCGB2A1O75556 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.35■□□□□ 0.53
SCGB2A1O75556 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.35■□□□□ 0.53
SCGB2A1O75556 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SCGB2A1O75556 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.35■□□□□ 0.53
SCGB2A1O75556 SLC6A10P-202ENST00000431994 2058 ntBASIC18.35■□□□□ 0.53
SCGB2A1O75556 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.35■□□□□ 0.53
SCGB2A1O75556 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 AC141586.4-201ENST00000624558 1573 ntBASIC18.34■□□□□ 0.53
SCGB2A1O75556 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.34■□□□□ 0.53
SCGB2A1O75556 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCGB2A1O75556 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCGB2A1O75556 AL139125.2-201ENST00000623134 1869 ntBASIC18.33■□□□□ 0.53
SCGB2A1O75556 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCGB2A1O75556 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SCGB2A1O75556 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCGB2A1O75556 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCGB2A1O75556 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.33■□□□□ 0.52
SCGB2A1O75556 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.33■□□□□ 0.52
SCGB2A1O75556 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCGB2A1O75556 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCGB2A1O75556 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.32■□□□□ 0.52
SCGB2A1O75556 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SCGB2A1O75556 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.32■□□□□ 0.52
SCGB2A1O75556 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCGB2A1O75556 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCGB2A1O75556 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCGB2A1O75556 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCGB2A1O75556 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCGB2A1O75556 AC093323.1-202ENST00000635031 2045 ntBASIC18.32■□□□□ 0.52
SCGB2A1O75556 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCGB2A1O75556 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCGB2A1O75556 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCGB2A1O75556 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCGB2A1O75556 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCGB2A1O75556 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCGB2A1O75556 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SCGB2A1O75556 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.31■□□□□ 0.52
SCGB2A1O75556 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.31■□□□□ 0.52
SCGB2A1O75556 RAP2CP1-202ENST00000605179 643 ntBASIC18.31■□□□□ 0.52
SCGB2A1O75556 MIR6089-201ENST00000616698 64 ntBASIC18.31■□□□□ 0.52
SCGB2A1O75556 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCGB2A1O75556 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.31■□□□□ 0.52
SCGB2A1O75556 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SCGB2A1O75556 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCGB2A1O75556 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.3■□□□□ 0.52
SCGB2A1O75556 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCGB2A1O75556 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCGB2A1O75556 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCGB2A1O75556 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCGB2A1O75556 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCGB2A1O75556 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SCGB2A1O75556 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
SCGB2A1O75556 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.29■□□□□ 0.52
SCGB2A1O75556 RNF126P1-201ENST00000567452 1320 ntBASIC18.29■□□□□ 0.52
SCGB2A1O75556 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SCGB2A1O75556 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCGB2A1O75556 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.29■□□□□ 0.52
SCGB2A1O75556 AC026202.3-201ENST00000600805 1127 ntBASIC18.29■□□□□ 0.52
SCGB2A1O75556 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCGB2A1O75556 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCGB2A1O75556 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCGB2A1O75556 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCGB2A1O75556 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCGB2A1O75556 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCGB2A1O75556 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SCGB2A1O75556 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.28■□□□□ 0.52
SCGB2A1O75556 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCGB2A1O75556 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.28■□□□□ 0.52
SCGB2A1O75556 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCGB2A1O75556 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCGB2A1O75556 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SCGB2A1O75556 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.27■□□□□ 0.52
SCGB2A1O75556 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCGB2A1O75556 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCGB2A1O75556 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SCGB2A1O75556 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.27■□□□□ 0.52
SCGB2A1O75556 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.27■□□□□ 0.52
SCGB2A1O75556 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms