Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.17■■□□□ 1.3
PCDHGA12O60330 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
PCDHGA12O60330 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA12O60330 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA12O60330 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.17■■□□□ 1.3
PCDHGA12O60330 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA12O60330 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGA12O60330 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGA12O60330 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.16■■□□□ 1.3
PCDHGA12O60330 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA12O60330 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA12O60330 AC133561.4-201ENST00000566112 224 ntBASIC23.16■■□□□ 1.3
PCDHGA12O60330 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA12O60330 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA12O60330 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGA12O60330 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGA12O60330 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHGA12O60330 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA12O60330 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA12O60330 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA12O60330 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHGA12O60330 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHGA12O60330 MIR4466-201ENST00000606121 54 ntBASIC23.15■■□□□ 1.3
PCDHGA12O60330 AC005837.3-201ENST00000612163 286 ntBASIC23.15■■□□□ 1.3
PCDHGA12O60330 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA12O60330 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGA12O60330 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGA12O60330 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGA12O60330 AC091060.1-201ENST00000623524 1766 ntBASIC23.14■■□□□ 1.3
PCDHGA12O60330 AC096631.2-201ENST00000436136 790 ntBASIC23.14■■□□□ 1.29
PCDHGA12O60330 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.14■■□□□ 1.29
PCDHGA12O60330 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGA12O60330 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHGA12O60330 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGA12O60330 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGA12O60330 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGA12O60330 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGA12O60330 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGA12O60330 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA12O60330 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PCDHGA12O60330 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA12O60330 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA12O60330 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA12O60330 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA12O60330 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA12O60330 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGA12O60330 AL512631.2-201ENST00000604634 923 ntBASIC23.11■■□□□ 1.29
PCDHGA12O60330 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA12O60330 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA12O60330 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGA12O60330 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PCDHGA12O60330 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA12O60330 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA12O60330 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA12O60330 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA12O60330 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGA12O60330 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGA12O60330 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHGA12O60330 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHGA12O60330 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHGA12O60330 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA12O60330 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA12O60330 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGA12O60330 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHGA12O60330 AF131216.4-201ENST00000638924 1588 ntBASIC23.08■■□□□ 1.29
PCDHGA12O60330 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
PCDHGA12O60330 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.08■■□□□ 1.28
PCDHGA12O60330 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGA12O60330 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA12O60330 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA12O60330 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHGA12O60330 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDHGA12O60330 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA12O60330 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHGA12O60330 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGA12O60330 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA12O60330 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA12O60330 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA12O60330 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHGA12O60330 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHGA12O60330 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGA12O60330 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGA12O60330 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA12O60330 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGA12O60330 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA12O60330 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHGA12O60330 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA12O60330 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA12O60330 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHGA12O60330 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA12O60330 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA12O60330 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA12O60330 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGA12O60330 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGA12O60330 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA12O60330 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDHGA12O60330 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA12O60330 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGA12O60330 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGA12O60330 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms