Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SSSCA1O60232 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSSCA1O60232 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSSCA1O60232 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.95■□□□□ 0.62
SSSCA1O60232 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSSCA1O60232 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SSSCA1O60232 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.95■□□□□ 0.62
SSSCA1O60232 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SSSCA1O60232 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSSCA1O60232 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.94■□□□□ 0.62
SSSCA1O60232 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSSCA1O60232 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSSCA1O60232 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.94■□□□□ 0.62
SSSCA1O60232 MIR6089-201ENST00000616698 64 ntBASIC18.94■□□□□ 0.62
SSSCA1O60232 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SSSCA1O60232 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SSSCA1O60232 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSSCA1O60232 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SSSCA1O60232 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SSSCA1O60232 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSSCA1O60232 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSSCA1O60232 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSSCA1O60232 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.93■□□□□ 0.62
SSSCA1O60232 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SSSCA1O60232 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
SSSCA1O60232 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SSSCA1O60232 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.93■□□□□ 0.62
SSSCA1O60232 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.93■□□□□ 0.62
SSSCA1O60232 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SSSCA1O60232 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.93■□□□□ 0.62
SSSCA1O60232 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.92■□□□□ 0.62
SSSCA1O60232 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SSSCA1O60232 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSSCA1O60232 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.92■□□□□ 0.62
SSSCA1O60232 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.92■□□□□ 0.62
SSSCA1O60232 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSSCA1O60232 HLA-V-202ENST00000446817 847 ntBASIC18.92■□□□□ 0.62
SSSCA1O60232 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.92■□□□□ 0.62
SSSCA1O60232 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.92■□□□□ 0.62
SSSCA1O60232 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SSSCA1O60232 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SSSCA1O60232 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SSSCA1O60232 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SSSCA1O60232 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SSSCA1O60232 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SSSCA1O60232 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.91■□□□□ 0.62
SSSCA1O60232 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.91■□□□□ 0.62
SSSCA1O60232 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSSCA1O60232 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSSCA1O60232 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSSCA1O60232 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SSSCA1O60232 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSSCA1O60232 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SSSCA1O60232 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.91■□□□□ 0.62
SSSCA1O60232 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSSCA1O60232 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSSCA1O60232 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SSSCA1O60232 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSSCA1O60232 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSSCA1O60232 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.9■□□□□ 0.62
SSSCA1O60232 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SSSCA1O60232 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.9■□□□□ 0.62
SSSCA1O60232 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.9■□□□□ 0.62
SSSCA1O60232 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSSCA1O60232 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.9■□□□□ 0.62
SSSCA1O60232 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.89■□□□□ 0.62
SSSCA1O60232 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SSSCA1O60232 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SSSCA1O60232 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.89■□□□□ 0.61
SSSCA1O60232 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SSSCA1O60232 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SSSCA1O60232 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SSSCA1O60232 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SSSCA1O60232 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSSCA1O60232 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.88■□□□□ 0.61
SSSCA1O60232 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SSSCA1O60232 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSSCA1O60232 AC126177.7-201ENST00000547904 679 ntBASIC18.88■□□□□ 0.61
SSSCA1O60232 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SSSCA1O60232 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSSCA1O60232 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.88■□□□□ 0.61
SSSCA1O60232 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.88■□□□□ 0.61
SSSCA1O60232 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SSSCA1O60232 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSSCA1O60232 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SSSCA1O60232 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSSCA1O60232 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSSCA1O60232 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSSCA1O60232 PKD1P6-201ENST00000343738 4769 ntBASIC18.87■□□□□ 0.61
SSSCA1O60232 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSSCA1O60232 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms