Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CXCL13O43927 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.94■□□□□ 0.94
CXCL13O43927 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.94■□□□□ 0.94
CXCL13O43927 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CXCL13O43927 BX664725.1-201ENST00000438252 379 ntBASIC20.94■□□□□ 0.94
CXCL13O43927 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CXCL13O43927 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.94■□□□□ 0.94
CXCL13O43927 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CXCL13O43927 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.93■□□□□ 0.94
CXCL13O43927 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CXCL13O43927 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CXCL13O43927 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXCL13O43927 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CXCL13O43927 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CXCL13O43927 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CXCL13O43927 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CXCL13O43927 AC239859.2-201ENST00000444165 318 ntBASIC20.93■□□□□ 0.94
CXCL13O43927 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.93■□□□□ 0.94
CXCL13O43927 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.93■□□□□ 0.94
CXCL13O43927 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXCL13O43927 AC020928.2-201ENST00000588717 2197 ntBASIC20.93■□□□□ 0.94
CXCL13O43927 AC022211.4-201ENST00000625094 2161 ntBASIC20.93■□□□□ 0.94
CXCL13O43927 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXCL13O43927 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CXCL13O43927 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.93■□□□□ 0.94
CXCL13O43927 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCL13O43927 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.92■□□□□ 0.94
CXCL13O43927 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.92■□□□□ 0.94
CXCL13O43927 AC137630.3-201ENST00000607245 391 ntBASIC20.92■□□□□ 0.94
CXCL13O43927 MIR6089-201ENST00000616698 64 ntBASIC20.92■□□□□ 0.94
CXCL13O43927 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.92■□□□□ 0.94
CXCL13O43927 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCL13O43927 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
CXCL13O43927 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CXCL13O43927 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CXCL13O43927 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CXCL13O43927 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CXCL13O43927 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CXCL13O43927 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CXCL13O43927 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CXCL13O43927 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CXCL13O43927 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXCL13O43927 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXCL13O43927 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXCL13O43927 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CXCL13O43927 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.9■□□□□ 0.94
CXCL13O43927 KRT125P-201ENST00000546827 989 ntBASIC20.9■□□□□ 0.94
CXCL13O43927 Z92544.1-202ENST00000571933 1220 ntBASIC20.9■□□□□ 0.94
CXCL13O43927 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.9■□□□□ 0.94
CXCL13O43927 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CXCL13O43927 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CXCL13O43927 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CXCL13O43927 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CXCL13O43927 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CXCL13O43927 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCL13O43927 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.89■□□□□ 0.93
CXCL13O43927 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.89■□□□□ 0.93
CXCL13O43927 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.89■□□□□ 0.93
CXCL13O43927 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CXCL13O43927 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CXCL13O43927 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.89■□□□□ 0.93
CXCL13O43927 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.89■□□□□ 0.93
CXCL13O43927 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CXCL13O43927 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CXCL13O43927 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.87■□□□□ 0.93
CXCL13O43927 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.87■□□□□ 0.93
CXCL13O43927 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CXCL13O43927 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.87■□□□□ 0.93
CXCL13O43927 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CXCL13O43927 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CXCL13O43927 AF131216.4-201ENST00000638924 1588 ntBASIC20.86■□□□□ 0.93
CXCL13O43927 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CXCL13O43927 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.86■□□□□ 0.93
CXCL13O43927 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCL13O43927 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCL13O43927 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.85■□□□□ 0.93
CXCL13O43927 MIR4787-201ENST00000607364 84 ntBASIC20.85■□□□□ 0.93
CXCL13O43927 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CXCL13O43927 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CXCL13O43927 AC021242.3-201ENST00000607598 1377 ntBASIC20.85■□□□□ 0.93
CXCL13O43927 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCL13O43927 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCL13O43927 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CXCL13O43927 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.84■□□□□ 0.93
CXCL13O43927 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CXCL13O43927 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CXCL13O43927 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CXCL13O43927 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXCL13O43927 AC142381.3-201ENST00000568208 1670 ntBASIC20.83■□□□□ 0.93
CXCL13O43927 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXCL13O43927 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CXCL13O43927 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.83■□□□□ 0.93
CXCL13O43927 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms