Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.86■□□□□ 0.77
SSNA1O43805 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.86■□□□□ 0.77
SSNA1O43805 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.86■□□□□ 0.77
SSNA1O43805 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SSNA1O43805 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SSNA1O43805 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.86■□□□□ 0.77
SSNA1O43805 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SSNA1O43805 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.86■□□□□ 0.77
SSNA1O43805 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SSNA1O43805 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SSNA1O43805 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SSNA1O43805 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSNA1O43805 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.85■□□□□ 0.77
SSNA1O43805 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SSNA1O43805 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SSNA1O43805 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SSNA1O43805 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSNA1O43805 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSNA1O43805 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSNA1O43805 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SSNA1O43805 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSNA1O43805 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SSNA1O43805 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
SSNA1O43805 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SSNA1O43805 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SSNA1O43805 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SSNA1O43805 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.82■□□□□ 0.76
SSNA1O43805 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SSNA1O43805 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSNA1O43805 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSNA1O43805 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.81■□□□□ 0.76
SSNA1O43805 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSNA1O43805 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SSNA1O43805 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSNA1O43805 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.81■□□□□ 0.76
SSNA1O43805 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SSNA1O43805 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
SSNA1O43805 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SSNA1O43805 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.8■□□□□ 0.76
SSNA1O43805 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SSNA1O43805 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SSNA1O43805 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.8■□□□□ 0.76
SSNA1O43805 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.79■□□□□ 0.76
SSNA1O43805 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.79■□□□□ 0.76
SSNA1O43805 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.79■□□□□ 0.76
SSNA1O43805 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
SSNA1O43805 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SSNA1O43805 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SSNA1O43805 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.78■□□□□ 0.76
SSNA1O43805 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.78■□□□□ 0.76
SSNA1O43805 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SSNA1O43805 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSNA1O43805 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SSNA1O43805 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.77■□□□□ 0.76
SSNA1O43805 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SSNA1O43805 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSNA1O43805 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SSNA1O43805 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms