Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.83■□□□□ 0.93
TRAF3IP2O43734 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAF3IP2O43734 AC090877.2-201ENST00000558441 1738 ntBASIC20.83■□□□□ 0.92
TRAF3IP2O43734 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP2O43734 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.83■□□□□ 0.92
TRAF3IP2O43734 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
TRAF3IP2O43734 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRAF3IP2O43734 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF3IP2O43734 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP2O43734 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAF3IP2O43734 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP2O43734 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRAF3IP2O43734 AC022616.5-201ENST00000518796 181 ntBASIC20.82■□□□□ 0.92
TRAF3IP2O43734 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.82■□□□□ 0.92
TRAF3IP2O43734 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAF3IP2O43734 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.8■□□□□ 0.92
TRAF3IP2O43734 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP2O43734 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRAF3IP2O43734 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAF3IP2O43734 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.78■□□□□ 0.92
TRAF3IP2O43734 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP2O43734 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRAF3IP2O43734 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP2O43734 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAF3IP2O43734 HLA-L-211ENST00000482052 1765 ntBASIC20.77■□□□□ 0.92
TRAF3IP2O43734 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP2O43734 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP2O43734 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAF3IP2O43734 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAF3IP2O43734 AC011551.1-201ENST00000614101 683 ntBASIC20.77■□□□□ 0.92
TRAF3IP2O43734 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.77■□□□□ 0.92
TRAF3IP2O43734 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.77■□□□□ 0.92
TRAF3IP2O43734 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRAF3IP2O43734 LINC01124-201ENST00000409786 2117 ntBASIC20.77■□□□□ 0.91
TRAF3IP2O43734 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRAF3IP2O43734 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAF3IP2O43734 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP2O43734 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAF3IP2O43734 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.75■□□□□ 0.91
TRAF3IP2O43734 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP2O43734 MIR4508-201ENST00000584178 70 ntBASIC20.75■□□□□ 0.91
TRAF3IP2O43734 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAF3IP2O43734 AC093323.1-202ENST00000635031 2045 ntBASIC20.75■□□□□ 0.91
TRAF3IP2O43734 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
TRAF3IP2O43734 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
TRAF3IP2O43734 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.73■□□□□ 0.91
TRAF3IP2O43734 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 AC103834.1-201ENST00000520383 144 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms