Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
NDUFB3O43676 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
NDUFB3O43676 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NDUFB3O43676 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFB3O43676 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NDUFB3O43676 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFB3O43676 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.46■□□□□ 0.71
NDUFB3O43676 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFB3O43676 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NDUFB3O43676 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.46■□□□□ 0.71
NDUFB3O43676 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.46■□□□□ 0.71
NDUFB3O43676 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFB3O43676 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFB3O43676 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NDUFB3O43676 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NDUFB3O43676 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.46■□□□□ 0.71
NDUFB3O43676 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDUFB3O43676 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
NDUFB3O43676 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NDUFB3O43676 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.45■□□□□ 0.7
NDUFB3O43676 MIR6089-201ENST00000616698 64 ntBASIC19.45■□□□□ 0.7
NDUFB3O43676 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.45■□□□□ 0.7
NDUFB3O43676 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NDUFB3O43676 AC142381.3-201ENST00000568208 1670 ntBASIC19.45■□□□□ 0.7
NDUFB3O43676 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NDUFB3O43676 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
NDUFB3O43676 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.44■□□□□ 0.7
NDUFB3O43676 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDUFB3O43676 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDUFB3O43676 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NDUFB3O43676 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDUFB3O43676 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDUFB3O43676 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.43■□□□□ 0.7
NDUFB3O43676 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.42■□□□□ 0.7
NDUFB3O43676 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFB3O43676 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFB3O43676 AP003733.4-201ENST00000623785 1697 ntBASIC19.42■□□□□ 0.7
NDUFB3O43676 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFB3O43676 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFB3O43676 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.42■□□□□ 0.7
NDUFB3O43676 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDUFB3O43676 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFB3O43676 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFB3O43676 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFB3O43676 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFB3O43676 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.41■□□□□ 0.7
NDUFB3O43676 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.41■□□□□ 0.7
NDUFB3O43676 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFB3O43676 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
NDUFB3O43676 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFB3O43676 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFB3O43676 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFB3O43676 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFB3O43676 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFB3O43676 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFB3O43676 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFB3O43676 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFB3O43676 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFB3O43676 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFB3O43676 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFB3O43676 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.39■□□□□ 0.69
NDUFB3O43676 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFB3O43676 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.39■□□□□ 0.69
NDUFB3O43676 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NDUFB3O43676 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFB3O43676 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NDUFB3O43676 MIR4281-201ENST00000580852 62 ntBASIC19.39■□□□□ 0.69
NDUFB3O43676 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFB3O43676 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFB3O43676 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFB3O43676 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.38■□□□□ 0.69
NDUFB3O43676 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.38■□□□□ 0.69
NDUFB3O43676 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.38■□□□□ 0.69
NDUFB3O43676 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFB3O43676 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
NDUFB3O43676 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFB3O43676 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.37■□□□□ 0.69
NDUFB3O43676 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.37■□□□□ 0.69
NDUFB3O43676 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFB3O43676 AL451085.2-201ENST00000605085 799 ntBASIC19.37■□□□□ 0.69
NDUFB3O43676 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NDUFB3O43676 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.37■□□□□ 0.69
NDUFB3O43676 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFB3O43676 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFB3O43676 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.36■□□□□ 0.69
NDUFB3O43676 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFB3O43676 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NDUFB3O43676 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFB3O43676 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NDUFB3O43676 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.35■□□□□ 0.69
NDUFB3O43676 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NDUFB3O43676 AC138932.3-201ENST00000567634 1902 ntBASIC19.35■□□□□ 0.69
NDUFB3O43676 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms