Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC011551.1-201ENST00000614101 683 ntBASIC22.2■■□□□ 1.14
PCDH17O14917 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH17O14917 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDH17O14917 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH17O14917 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH17O14917 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDH17O14917 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.19■■□□□ 1.14
PCDH17O14917 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH17O14917 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDH17O14917 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDH17O14917 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
PCDH17O14917 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PCDH17O14917 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH17O14917 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH17O14917 AL139125.2-201ENST00000623134 1869 ntBASIC22.18■■□□□ 1.14
PCDH17O14917 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH17O14917 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.18■■□□□ 1.14
PCDH17O14917 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDH17O14917 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH17O14917 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
PCDH17O14917 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDH17O14917 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH17O14917 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDH17O14917 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDH17O14917 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDH17O14917 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH17O14917 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH17O14917 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH17O14917 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDH17O14917 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDH17O14917 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDH17O14917 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDH17O14917 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH17O14917 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH17O14917 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDH17O14917 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDH17O14917 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDH17O14917 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH17O14917 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH17O14917 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH17O14917 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDH17O14917 BX664725.1-201ENST00000438252 379 ntBASIC22.15■■□□□ 1.14
PCDH17O14917 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.15■■□□□ 1.14
PCDH17O14917 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH17O14917 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDH17O14917 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH17O14917 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PCDH17O14917 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH17O14917 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH17O14917 AC120024.1-201ENST00000562672 995 ntBASIC22.14■■□□□ 1.13
PCDH17O14917 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH17O14917 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH17O14917 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDH17O14917 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH17O14917 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH17O14917 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH17O14917 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH17O14917 KRT125P-201ENST00000546827 989 ntBASIC22.13■■□□□ 1.13
PCDH17O14917 AC137630.3-201ENST00000607245 391 ntBASIC22.13■■□□□ 1.13
PCDH17O14917 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH17O14917 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDH17O14917 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH17O14917 GUSBP5-201ENST00000418136 578 ntBASIC22.12■■□□□ 1.13
PCDH17O14917 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH17O14917 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PCDH17O14917 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDH17O14917 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH17O14917 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDH17O14917 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
PCDH17O14917 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH17O14917 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDH17O14917 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.11■■□□□ 1.13
PCDH17O14917 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
PCDH17O14917 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDH17O14917 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH17O14917 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH17O14917 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDH17O14917 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.11■■□□□ 1.13
PCDH17O14917 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH17O14917 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDH17O14917 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH17O14917 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PCDH17O14917 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH17O14917 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH17O14917 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDH17O14917 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH17O14917 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH17O14917 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.1■■□□□ 1.13
PCDH17O14917 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDH17O14917 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH17O14917 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDH17O14917 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms