Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21■□□□□ 0.95
TNFSF11O14788 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TNFSF11O14788 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21■□□□□ 0.95
TNFSF11O14788 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF11O14788 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF11O14788 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TNFSF11O14788 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF11O14788 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF11O14788 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF11O14788 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF11O14788 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TNFSF11O14788 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF11O14788 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.98■□□□□ 0.95
TNFSF11O14788 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
TNFSF11O14788 MIR6089-201ENST00000616698 64 ntBASIC20.98■□□□□ 0.95
TNFSF11O14788 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF11O14788 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF11O14788 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF11O14788 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF11O14788 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF11O14788 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF11O14788 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF11O14788 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.97■□□□□ 0.95
TNFSF11O14788 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF11O14788 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFSF11O14788 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF11O14788 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
TNFSF11O14788 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF11O14788 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF11O14788 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.96■□□□□ 0.95
TNFSF11O14788 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF11O14788 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF11O14788 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF11O14788 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
TNFSF11O14788 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TNFSF11O14788 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TNFSF11O14788 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF11O14788 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF11O14788 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.95■□□□□ 0.94
TNFSF11O14788 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.95■□□□□ 0.94
TNFSF11O14788 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TNFSF11O14788 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF11O14788 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF11O14788 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF11O14788 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF11O14788 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TNFSF11O14788 BX664725.1-201ENST00000438252 379 ntBASIC20.94■□□□□ 0.94
TNFSF11O14788 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF11O14788 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.93■□□□□ 0.94
TNFSF11O14788 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.93■□□□□ 0.94
TNFSF11O14788 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF11O14788 AC142381.3-201ENST00000568208 1670 ntBASIC20.93■□□□□ 0.94
TNFSF11O14788 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TNFSF11O14788 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.93■□□□□ 0.94
TNFSF11O14788 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TNFSF11O14788 AC239859.2-201ENST00000444165 318 ntBASIC20.93■□□□□ 0.94
TNFSF11O14788 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.93■□□□□ 0.94
TNFSF11O14788 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.93■□□□□ 0.94
TNFSF11O14788 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.93■□□□□ 0.94
TNFSF11O14788 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF11O14788 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TNFSF11O14788 AC138932.3-201ENST00000567634 1902 ntBASIC20.92■□□□□ 0.94
TNFSF11O14788 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.92■□□□□ 0.94
TNFSF11O14788 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF11O14788 AC137630.3-201ENST00000607245 391 ntBASIC20.92■□□□□ 0.94
TNFSF11O14788 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TNFSF11O14788 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF11O14788 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF11O14788 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TNFSF11O14788 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.92■□□□□ 0.94
TNFSF11O14788 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF11O14788 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF11O14788 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TNFSF11O14788 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
TNFSF11O14788 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF11O14788 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
TNFSF11O14788 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF11O14788 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TNFSF11O14788 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.91■□□□□ 0.94
TNFSF11O14788 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.91■□□□□ 0.94
TNFSF11O14788 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.91■□□□□ 0.94
TNFSF11O14788 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TNFSF11O14788 KRT125P-201ENST00000546827 989 ntBASIC20.9■□□□□ 0.94
TNFSF11O14788 Z92544.1-202ENST00000571933 1220 ntBASIC20.9■□□□□ 0.94
TNFSF11O14788 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TNFSF11O14788 AF131216.4-201ENST00000638924 1588 ntBASIC20.89■□□□□ 0.94
TNFSF11O14788 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.89■□□□□ 0.93
TNFSF11O14788 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF11O14788 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF11O14788 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF11O14788 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF11O14788 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.89■□□□□ 0.93
TNFSF11O14788 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.89■□□□□ 0.93
TNFSF11O14788 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TNFSF11O14788 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms