Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM49D1C9J1S8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM49D1C9J1S8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.36■■□□□ 1.33
TRIM49D1C9J1S8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49D1C9J1S8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
TRIM49D1C9J1S8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49D1C9J1S8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM49D1C9J1S8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
TRIM49D1C9J1S8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIM49D1C9J1S8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIM49D1C9J1S8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TRIM49D1C9J1S8 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49D1C9J1S8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TRIM49D1C9J1S8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIM49D1C9J1S8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.33■■□□□ 1.33
TRIM49D1C9J1S8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
TRIM49D1C9J1S8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TRIM49D1C9J1S8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIM49D1C9J1S8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIM49D1C9J1S8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.32■■□□□ 1.32
TRIM49D1C9J1S8 AC022413.1-201ENST00000624602 984 ntBASIC23.32■■□□□ 1.32
TRIM49D1C9J1S8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 FOXO3B-201ENST00000395675 1928 ntBASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIM49D1C9J1S8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIM49D1C9J1S8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49D1C9J1S8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49D1C9J1S8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49D1C9J1S8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM49D1C9J1S8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.3■■□□□ 1.32
TRIM49D1C9J1S8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIM49D1C9J1S8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49D1C9J1S8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49D1C9J1S8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TRIM49D1C9J1S8 MIR7108-201ENST00000614319 87 ntBASIC23.29■■□□□ 1.32
TRIM49D1C9J1S8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.29■■□□□ 1.32
TRIM49D1C9J1S8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.29■■□□□ 1.32
TRIM49D1C9J1S8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TRIM49D1C9J1S8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 AC007029.1-201ENST00000604183 313 ntBASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIM49D1C9J1S8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM49D1C9J1S8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
TRIM49D1C9J1S8 MIR639-201ENST00000384974 98 ntBASIC23.27■■□□□ 1.32
TRIM49D1C9J1S8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.27■■□□□ 1.32
TRIM49D1C9J1S8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIM49D1C9J1S8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIM49D1C9J1S8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.27■■□□□ 1.32
TRIM49D1C9J1S8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TRIM49D1C9J1S8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM49D1C9J1S8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TRIM49D1C9J1S8 RAP2CP1-202ENST00000605179 643 ntBASIC23.25■■□□□ 1.31
TRIM49D1C9J1S8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms