Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
C1QTNF9BB2RNN3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C1QTNF9BB2RNN3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.26■■□□□ 1.15
C1QTNF9BB2RNN3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.26■■□□□ 1.15
C1QTNF9BB2RNN3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.26■■□□□ 1.15
C1QTNF9BB2RNN3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.26■■□□□ 1.15
C1QTNF9BB2RNN3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.26■■□□□ 1.15
C1QTNF9BB2RNN3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 AL139393.2-201ENST00000608721 2025 ntBASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
C1QTNF9BB2RNN3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 AL031602.1-201ENST00000633169 911 ntBASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C1QTNF9BB2RNN3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 SERBP1P1-201ENST00000396021 1160 ntBASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C1QTNF9BB2RNN3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 ABHD17AP1-201ENST00000358206 933 ntBASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
C1QTNF9BB2RNN3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C1QTNF9BB2RNN3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C1QTNF9BB2RNN3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.21■■□□□ 1.15
C1QTNF9BB2RNN3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.21■■□□□ 1.15
C1QTNF9BB2RNN3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
C1QTNF9BB2RNN3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.2■■□□□ 1.15
C1QTNF9BB2RNN3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 AC092171.4-201ENST00000609130 632 ntBASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C1QTNF9BB2RNN3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4L2-201ENST00000561772 1275 ntBASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4L6-201ENST00000626483 1275 ntBASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4L1-201ENST00000627662 1275 ntBASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4L8-201ENST00000629013 1275 ntBASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4L3-201ENST00000630187 1275 ntBASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4L7-201ENST00000630678 1275 ntBASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 DUX4L5-201ENST00000630834 1275 ntBASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.19■■□□□ 1.14
C1QTNF9BB2RNN3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C1QTNF9BB2RNN3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
C1QTNF9BB2RNN3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
C1QTNF9BB2RNN3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
C1QTNF9BB2RNN3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
C1QTNF9BB2RNN3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.18■■□□□ 1.14
C1QTNF9BB2RNN3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.18■■□□□ 1.14
C1QTNF9BB2RNN3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
C1QTNF9BB2RNN3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 YBX1P1-201ENST00000445822 960 ntBASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.16■■□□□ 1.14
C1QTNF9BB2RNN3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
C1QTNF9BB2RNN3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
C1QTNF9BB2RNN3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.15■■□□□ 1.14
C1QTNF9BB2RNN3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
C1QTNF9BB2RNN3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms