Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.66■■□□□ 1.06
TRBV11-1A0A0K0K1C0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV11-1A0A0K0K1C0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRBV11-1A0A0K0K1C0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV11-1A0A0K0K1C0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.64■■□□□ 1.05
TRBV11-1A0A0K0K1C0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV11-1A0A0K0K1C0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.64■■□□□ 1.05
TRBV11-1A0A0K0K1C0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV11-1A0A0K0K1C0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRBV11-1A0A0K0K1C0 AF131216.4-201ENST00000638924 1588 ntBASIC21.64■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 TSPY9P-201ENST00000440215 945 ntBASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 TSPY11P-201ENST00000442607 1045 ntBASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRBV11-1A0A0K0K1C0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.62■■□□□ 1.05
TRBV11-1A0A0K0K1C0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 MIR6089-201ENST00000616698 64 ntBASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRBV11-1A0A0K0K1C0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 AC092028.1-203ENST00000608262 953 ntBASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRBV11-1A0A0K0K1C0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 AL356441.2-201ENST00000443009 864 ntBASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRBV11-1A0A0K0K1C0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TRBV11-1A0A0K0K1C0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRBV11-1A0A0K0K1C0 UNC93B8-201ENST00000511903 705 ntBASIC21.58■■□□□ 1.05
TRBV11-1A0A0K0K1C0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
TRBV11-1A0A0K0K1C0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TRBV11-1A0A0K0K1C0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRBV11-1A0A0K0K1C0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 KRT16P3-201ENST00000439127 1283 ntBASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.56■■□□□ 1.04
TRBV11-1A0A0K0K1C0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms