Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 AC120024.1-201ENST00000562672 995 ntBASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TRBV5-4A0A0C4DH59 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TRBV5-4A0A0C4DH59 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 KRT8P33-201ENST00000508125 1423 ntBASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TRBV5-4A0A0C4DH59 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.11■■□□□ 1.29
TRBV5-4A0A0C4DH59 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRBV5-4A0A0C4DH59 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRBV5-4A0A0C4DH59 AC103724.3-201ENST00000564481 992 ntBASIC23.11■■□□□ 1.29
TRBV5-4A0A0C4DH59 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
TRBV5-4A0A0C4DH59 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TRBV5-4A0A0C4DH59 HLA-L-211ENST00000482052 1765 ntBASIC23.11■■□□□ 1.29
TRBV5-4A0A0C4DH59 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TRBV5-4A0A0C4DH59 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.1■■□□□ 1.29
TRBV5-4A0A0C4DH59 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TRBV5-4A0A0C4DH59 YBX1P4-201ENST00000392794 808 ntBASIC23.1■■□□□ 1.29
TRBV5-4A0A0C4DH59 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.1■■□□□ 1.29
TRBV5-4A0A0C4DH59 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.1■■□□□ 1.29
TRBV5-4A0A0C4DH59 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.1■■□□□ 1.29
TRBV5-4A0A0C4DH59 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV5-4A0A0C4DH59 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV5-4A0A0C4DH59 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV5-4A0A0C4DH59 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV5-4A0A0C4DH59 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV5-4A0A0C4DH59 THA1P-201ENST00000590384 1145 ntBASIC23.09■■□□□ 1.29
TRBV5-4A0A0C4DH59 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TRBV5-4A0A0C4DH59 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV5-4A0A0C4DH59 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV5-4A0A0C4DH59 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV5-4A0A0C4DH59 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.08■■□□□ 1.29
TRBV5-4A0A0C4DH59 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.08■■□□□ 1.29
TRBV5-4A0A0C4DH59 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TRBV5-4A0A0C4DH59 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.08■■□□□ 1.28
TRBV5-4A0A0C4DH59 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
TRBV5-4A0A0C4DH59 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
TRBV5-4A0A0C4DH59 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRBV5-4A0A0C4DH59 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRBV5-4A0A0C4DH59 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.07■■□□□ 1.28
TRBV5-4A0A0C4DH59 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 MIR4281-201ENST00000580852 62 ntBASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.06■■□□□ 1.28
TRBV5-4A0A0C4DH59 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRBV5-4A0A0C4DH59 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRBV5-4A0A0C4DH59 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRBV5-4A0A0C4DH59 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
TRBV5-4A0A0C4DH59 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.04■■□□□ 1.28
TRBV5-4A0A0C4DH59 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRBV5-4A0A0C4DH59 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRBV5-4A0A0C4DH59 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRBV5-4A0A0C4DH59 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRBV5-4A0A0C4DH59 LINC00543-201ENST00000567234 1845 ntBASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 RARRES2P1-201ENST00000474487 481 ntBASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 LINC01124-201ENST00000409786 2117 ntBASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TRBV5-4A0A0C4DH59 AC141586.4-201ENST00000624558 1573 ntBASIC23.02■■□□□ 1.28
TRBV5-4A0A0C4DH59 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
TRBV5-4A0A0C4DH59 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
TRBV5-4A0A0C4DH59 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TRBV5-4A0A0C4DH59 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms