Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 MIR4787-201ENST00000607364 84 ntBASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV20A0A0B4J274 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV20A0A0B4J274 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRAV20A0A0B4J274 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV20A0A0B4J274 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV20A0A0B4J274 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV20A0A0B4J274 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRAV20A0A0B4J274 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV20A0A0B4J274 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV20A0A0B4J274 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.66■□□□□ 0.74
TRAV20A0A0B4J274 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TRAV20A0A0B4J274 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV20A0A0B4J274 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 AC120024.1-201ENST00000562672 995 ntBASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV20A0A0B4J274 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.64■□□□□ 0.74
TRAV20A0A0B4J274 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TRAV20A0A0B4J274 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 AC137630.3-201ENST00000607245 391 ntBASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV20A0A0B4J274 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV20A0A0B4J274 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 AC079834.2-201ENST00000609776 1949 ntBASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV20A0A0B4J274 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV20A0A0B4J274 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV20A0A0B4J274 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV20A0A0B4J274 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.6■□□□□ 0.73
TRAV20A0A0B4J274 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV20A0A0B4J274 AC012676.1-201ENST00000574705 1949 ntBASIC19.6■□□□□ 0.73
TRAV20A0A0B4J274 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV20A0A0B4J274 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV20A0A0B4J274 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV20A0A0B4J274 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV20A0A0B4J274 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV20A0A0B4J274 KRT16P3-201ENST00000439127 1283 ntBASIC19.58■□□□□ 0.72
TRAV20A0A0B4J274 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.58■□□□□ 0.72
TRAV20A0A0B4J274 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV20A0A0B4J274 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRAV20A0A0B4J274 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV20A0A0B4J274 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV20A0A0B4J274 AC021242.3-201ENST00000607598 1377 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms