Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV8-1A0A0A6YYK1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-1A0A0A6YYK1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-1A0A0A6YYK1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV8-1A0A0A6YYK1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV8-1A0A0A6YYK1 HLA-L-211ENST00000482052 1765 ntBASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 AL157400.5-201ENST00000507624 621 ntBASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV8-1A0A0A6YYK1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV8-1A0A0A6YYK1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 AC079834.2-201ENST00000609776 1949 ntBASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 AC025884.2-201ENST00000553429 711 ntBASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV8-1A0A0A6YYK1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MIR3960-201ENST00000583311 91 ntBASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TRAV8-1A0A0A6YYK1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
TRAV8-1A0A0A6YYK1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV8-1A0A0A6YYK1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV8-1A0A0A6YYK1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAV8-1A0A0A6YYK1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 MIR3648-2-201ENST00000581792 180 ntBASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV8-1A0A0A6YYK1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms