Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHB13Q9Y5F0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 TSPY26P-202ENST00000565928 3884 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 PMS2P2-201ENST00000425039 1128 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AC097493.3-201ENST00000509725 367 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AC092451.2-201ENST00000538746 658 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AC024933.1-201ENST00000608472 348 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AC097478.2-201ENST00000610572 514 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AC084782.3-201ENST00000612282 578 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 TEX28P1-201ENST00000613479 1221 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 TEX28P2-201ENST00000617764 1221 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 AL033527.5-202ENST00000641632 1098 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 CICP13-201ENST00000422015 2789 ntBASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHB13Q9Y5F0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PCDHB13Q9Y5F0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 AC136604.1-201ENST00000418535 575 ntBASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 TREML5P-201ENST00000421694 576 ntBASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 DUX4L27-201ENST00000554796 1261 ntBASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHB13Q9Y5F0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms