Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 AP000842.3-202ENST00000569238 1080 ntBASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 AC024267.1-201ENST00000582320 895 ntBASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 FAM45BP-202ENST00000592932 1624 ntBASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 MIR346-201ENST00000362234 95 ntBASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 CEND1P1-201ENST00000451006 455 ntBASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 RNA5SP410-201ENST00000516285 106 ntBASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AC005829.1-201ENST00000570002 483 ntBASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AC061975.2-201ENST00000581722 295 ntBASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AC134407.2-201ENST00000625089 1978 ntBASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RHBDD3Q9Y3P4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 LINC02228-204ENST00000642115 2962 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 ELL2P1-201ENST00000413990 1906 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 UXT-AS1-201ENST00000590504 1525 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 AL592309.1-201ENST00000443127 649 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 DNAJB3-201ENST00000446806 729 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 KRT8P23-201ENST00000560090 1207 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms