Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
L1RE1Q9UN81 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.27■□□□□ 0.35
L1RE1Q9UN81 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.27■□□□□ 0.35
L1RE1Q9UN81 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
L1RE1Q9UN81 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.26■□□□□ 0.35
L1RE1Q9UN81 FAM8A3P-201ENST00000427218 844 ntBASIC17.26■□□□□ 0.35
L1RE1Q9UN81 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.26■□□□□ 0.35
L1RE1Q9UN81 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 AJ011932.1-201ENST00000621707 465 ntBASIC17.26■□□□□ 0.35
L1RE1Q9UN81 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 AC104581.4-201ENST00000623126 3052 ntBASIC17.26■□□□□ 0.35
L1RE1Q9UN81 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.26■□□□□ 0.35
L1RE1Q9UN81 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 SPDYE17-201ENST00000412399 783 ntBASIC17.25■□□□□ 0.35
L1RE1Q9UN81 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 AC245100.5-201ENST00000452108 331 ntBASIC17.25■□□□□ 0.35
L1RE1Q9UN81 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
L1RE1Q9UN81 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
L1RE1Q9UN81 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms