Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 FGD5P1-202ENST00000614866 2498 ntBASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 SPCS2P4-201ENST00000436160 681 ntBASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CNOT11Q9UKZ1 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNOT11Q9UKZ1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNOT11Q9UKZ1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNOT11Q9UKZ1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CNOT11Q9UKZ1 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CNOT11Q9UKZ1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CNOT11Q9UKZ1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 AC011477.6-201ENST00000604980 1927 ntBASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 AL592309.1-201ENST00000443127 649 ntBASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 AC093520.2-201ENST00000561830 333 ntBASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 AC005622.1-201ENST00000636801 1703 ntBASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CNOT11Q9UKZ1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 AL627223.1-201ENST00000416693 442 ntBASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 KRT18P34-201ENST00000488218 1270 ntBASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 LINC01225-203ENST00000563550 1244 ntBASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 AC092127.1-201ENST00000567093 3455 ntBASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.19■□□□□ 0.02
CNOT11Q9UKZ1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms