Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 AP000842.3-202ENST00000569238 1080 ntBASIC15.55■□□□□ 0.08
MKS1Q9NXB0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 RN7SL510P-201ENST00000581311 263 ntBASIC15.55■□□□□ 0.08
MKS1Q9NXB0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.55■□□□□ 0.08
MKS1Q9NXB0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 TFAMP1-201ENST00000412727 736 ntBASIC15.54■□□□□ 0.08
MKS1Q9NXB0 ADH5P3-201ENST00000433842 1137 ntBASIC15.54■□□□□ 0.08
MKS1Q9NXB0 RN7SL589P-201ENST00000481268 310 ntBASIC15.54■□□□□ 0.08
MKS1Q9NXB0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.54■□□□□ 0.08
MKS1Q9NXB0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 FAM86C2P-203ENST00000528684 1004 ntBASIC15.53■□□□□ 0.08
MKS1Q9NXB0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.53■□□□□ 0.08
MKS1Q9NXB0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 SLC25A6P4-201ENST00000586535 553 ntBASIC15.53■□□□□ 0.08
MKS1Q9NXB0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms