Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PDLIM7Q9NR12 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 Z93015.1-201ENST00000451718 390 ntBASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 AC023310.1-201ENST00000554836 735 ntBASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 AC016629.1-201ENST00000596579 586 ntBASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDLIM7Q9NR12 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM7Q9NR12 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM7Q9NR12 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM7Q9NR12 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PDLIM7Q9NR12 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 AC007969.1-201ENST00000433675 447 ntBASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 AC015967.2-201ENST00000624092 234 ntBASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 AC006435.4-201ENST00000625037 234 ntBASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 AL356737.1-201ENST00000634391 234 ntBASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 AC244452.3-201ENST00000636814 210 ntBASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDLIM7Q9NR12 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 AKR7A2P1-201ENST00000460134 915 ntBASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms