Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 AL078644.1-201ENST00000609881 752 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 BX640515.1-201ENST00000617215 977 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 AC026748.1-201ENST00000624349 3251 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 CICP23-201ENST00000605013 2741 ntBASIC15.16■□□□□ 0.02
PIF1Q9H611 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PIF1Q9H611 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PIF1Q9H611 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.16■□□□□ 0.02
PIF1Q9H611 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
PIF1Q9H611 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.15■□□□□ 0.02
PIF1Q9H611 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PIF1Q9H611 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.15■□□□□ 0.02
PIF1Q9H611 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.15■□□□□ 0.02
PIF1Q9H611 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PIF1Q9H611 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PIF1Q9H611 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.15■□□□□ 0.02
PIF1Q9H611 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.15■□□□□ 0.02
PIF1Q9H611 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 IGLL3P-201ENST00000412472 434 ntBASIC15.15■□□□□ 0.02
PIF1Q9H611 AC098831.1-202ENST00000438821 336 ntBASIC15.15■□□□□ 0.02
PIF1Q9H611 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.15■□□□□ 0.02
PIF1Q9H611 MIR4321-201ENST00000592276 80 ntBASIC15.15■□□□□ 0.02
PIF1Q9H611 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.15■□□□□ 0.02
PIF1Q9H611 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PIF1Q9H611 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.15■□□□□ 0.02
PIF1Q9H611 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
PIF1Q9H611 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PIF1Q9H611 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PIF1Q9H611 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.14■□□□□ 0.01
PIF1Q9H611 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
PIF1Q9H611 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PIF1Q9H611 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PIF1Q9H611 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 AC245100.5-201ENST00000452108 331 ntBASIC15.14■□□□□ 0.01
PIF1Q9H611 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.14■□□□□ 0.01
PIF1Q9H611 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.14■□□□□ 0.01
PIF1Q9H611 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.14■□□□□ 0.01
PIF1Q9H611 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
PIF1Q9H611 AL049840.3-201ENST00000602669 611 ntBASIC15.14■□□□□ 0.01
PIF1Q9H611 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PIF1Q9H611 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms