Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 AC026979.3-201ENST00000607315 403 ntBASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.85■□□□□ 0.61
UPF3BQ9BZI7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 MST1L-201ENST00000442552 2185 ntBASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 COX20P2-201ENST00000452636 358 ntBASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 AC105021.1-202ENST00000570572 669 ntBASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 NFIC-211ENST00000641145 8399 ntBASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPF3BQ9BZI7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 NORAD-201ENST00000565493 5339 ntBASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPF3BQ9BZI7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 RBPMS2P1-201ENST00000437762 623 ntBASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 SPDYE14P-201ENST00000442619 822 ntBASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 AC018529.1-201ENST00000613063 361 ntBASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 AL607033.1-201ENST00000623900 1599 ntBASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UPF3BQ9BZI7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 AC006058.4-201ENST00000624016 1670 ntBASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 TCAF2P1-201ENST00000291129 2421 ntBASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms