Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 AC136604.1-201ENST00000418535 575 ntBASIC13.22□□□□□ -0.29
CCL13Q99616 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL13Q99616 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL13Q99616 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL13Q99616 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL13Q99616 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL13Q99616 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.22□□□□□ -0.29
CCL13Q99616 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.22□□□□□ -0.29
CCL13Q99616 AC008738.7-201ENST00000609744 511 ntBASIC13.22□□□□□ -0.29
CCL13Q99616 AC092127.1-201ENST00000567093 3455 ntBASIC13.22□□□□□ -0.29
CCL13Q99616 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CCL13Q99616 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL13Q99616 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL13Q99616 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL13Q99616 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 FAM8A3P-201ENST00000427218 844 ntBASIC13.21□□□□□ -0.29
CCL13Q99616 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 UGT1A2P-201ENST00000454886 866 ntBASIC13.21□□□□□ -0.29
CCL13Q99616 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 AC135586.1-201ENST00000539323 574 ntBASIC13.21□□□□□ -0.29
CCL13Q99616 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.21□□□□□ -0.29
CCL13Q99616 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
CCL13Q99616 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.21□□□□□ -0.29
CCL13Q99616 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 AC074044.1-201ENST00000609673 707 ntBASIC13.21□□□□□ -0.29
CCL13Q99616 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.21□□□□□ -0.29
CCL13Q99616 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CCL13Q99616 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.21□□□□□ -0.29
CCL13Q99616 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CCL13Q99616 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL13Q99616 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL13Q99616 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CCL13Q99616 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
CCL13Q99616 Z97205.2-201ENST00000564697 1639 ntBASIC13.21□□□□□ -0.3
CCL13Q99616 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.2□□□□□ -0.3
CCL13Q99616 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CCL13Q99616 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CCL13Q99616 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CCL13Q99616 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
CCL13Q99616 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms